RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 KIR2DS3K7RE56 304 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 PSMD9O00233 223 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 PMS2P2O95744 297 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 ITGB2P05107 769 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 LPLP06858 475 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 TMIGD3P0DMS9 266 aaPredicted RBP12.45□□□□□ -0.42
VPS33A-208ENST00000543633 PTHLHP12272 177 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 ATF4P18848 351 aaPredicted RBP12.45□□□□□ -0.42
VPS33A-208ENST00000543633 CENPAP49450 140 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 DMWDQ09019 674 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 KIR2DS5Q14953 304 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 ALG11Q2TAA5 492 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 GXYLT1Q4G148 440 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 C7orf57Q8NEG2 295 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 OR52B4Q8NGK2 314 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 TNFAIP8L1Q8WVP5 186 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 HMGB4Q8WW32 186 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 ASB17Q8WXJ9 295 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 TMEM106AQ96A25 262 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 ELSPBP1Q96BH3 223 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 SPACA7Q96KW9 195 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 DGAT2Q96PD7 388 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 INTS14Q96SY0 518 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 FXYD6Q9H0Q3 95 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 SLCO5A1Q9H2Y9 848 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 SCPEP1Q9HB40 452 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 LRIT1Q9P2V4 623 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 PRODH2Q9UF12 536 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 IKZF2Q9UKS7 526 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 OR10H1Q9Y4A9 318 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 A0A0A6YYH2 397 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 SLC22A23A1A5C7 686 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 A6NJ64 397 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 GOSR2O14653 212 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 RLN1P04808 185 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 GTF2F2P13984 249 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 MPGP29372 298 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 PRSS3P35030 304 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 SEC13P55735 322 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 SRSF4Q08170 494 aaKnown RBP12.45□□□□□ -0.42
VPS33A-208ENST00000543633 ZNF273Q14593 569 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 RAB11BQ15907 218 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 TUSC1Q2TAM9 212 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 PRTGQ2VWP7 1150 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 SFRP5Q5T4F7 317 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 NKAIN2Q5VXU1 208 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 FAM166AQ6J272 317 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 LPCAT3Q6P1A2 487 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 ALKAL2Q6UX46 152 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 MAMSTRQ6ZN01 415 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 MUC20Q8N307 709 aaPredicted RBP12.45□□□□□ -0.42
VPS33A-208ENST00000543633 CLEC1AQ8NC01 280 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 OR9A4Q8NGU2 314 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 OR1S1Q8NH92 325 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 COQ8AQ8NI60 647 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 GPX8Q8TED1 209 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 SLC25A21Q9BQT8 299 aaPredicted RBP12.45□□□□□ -0.42
VPS33A-208ENST00000543633 POTEKPQ9BYX7 375 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 SEMA6CQ9H3T2 930 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 HRASLS2Q9NWW9 162 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 GRHPRQ9UBQ7 328 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 DOCK8Q8NF50 2099 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 A0A0D9SG52 128 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 D6RAR5 112 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 BLOC1S5-TXNDC5H3BN57 136 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 TGFBR3LH3BV60 316 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 CLDN4O14493 209 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 WNT11O96014 354 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 POU3F2P20265 443 aaPredicted RBP12.44□□□□□ -0.42
VPS33A-208ENST00000543633 GDI1P31150 447 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 POU3F4P49335 361 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 TAS2R19P59542 299 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 SKP2Q13309 424 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 BIKQ13323 160 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 ZNF660Q6AZW8 331 aaPredicted RBP12.44□□□□□ -0.42
VPS33A-208ENST00000543633 OR7E24Q6IFN5 339 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 IQCF2Q8IXL9 164 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 SHISA5Q8N114 240 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 TMEM229BQ8NBD8 167 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 OR6N2Q8NGY6 317 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 OR4C3Q8NH37 302 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 C16orf52Q8NHV5 167 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 GPBAR1Q8TDU6 330 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 LPAR4Q99677 370 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 SEMA4CQ9C0C4 833 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 FKRPQ9H9S5 495 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 PRTFDC1Q9NRG1 225 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 UBQLN4Q9NRR5 601 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 COQ3Q9NZJ6 369 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 A0A1W2PQF6 199 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 CD8AP01732 235 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 MAS1P04201 325 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 CD37P11049 281 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 HOXB2P14652 356 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 MGMTP16455 207 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 FSTP19883 344 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 KIR3DL2P43630 455 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 MAZP56270 477 aaKnown RBP12.44□□□□□ -0.42
VPS33A-208ENST00000543633 FGL1Q08830 312 aa12.44□□□□□ -0.42
VPS33A-208ENST00000543633 MESTQ5EB52 335 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms