RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 CALB2P22676 271 aa13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 CALCRP30988 508 aa13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 CDKN1AP38936 164 aa13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 FABP6P51161 128 aa13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 ATP5J2P56134 94 aa13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 TAF11Q15544 211 aa13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 OAFQ86UD1 273 aa13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 CDK20Q8IZL9 346 aa13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 ARHGAP24Q8N264 748 aa13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 MUC15Q8N387 334 aa13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 NOXO1Q8NFA2 376 aa13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 MCHR2Q969V1 340 aa13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 TNFRSF13CQ96RJ3 184 aa13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 ZNF347Q96SE7 839 aa13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 DENND2DQ9H6A0 471 aaPredicted RBP13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 NOX3Q9HBY0 568 aa13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 CBLN4Q9NTU7 201 aa13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 TMEM38BQ9NVV0 291 aa13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 STX18Q9P2W9 335 aaKnown RBP13.42□□□□□ -0.26
ECHDC2-223ENST00000542552 TRAV27A0A087WT01 109 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 TRBV4-1A0A0J9YWV2 114 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 MCIDASD6RGH6 385 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 DIRAS1O95057 198 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 ZNF14P17017 642 aaPredicted RBP13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 ZNF26P17031 533 aaPredicted RBP13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 ITGA2P17301 1181 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 APOBEC3AP31941 199 aaPredicted RBP13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 GPR4P46093 362 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 LIMS1P48059 325 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 IDH3GP51553 393 aaPredicted RBP13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 CLRN1P58418 232 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 RPL27P61353 136 aaKnown RBP13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 HGFACQ04756 655 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 GSG1Q2KHT4 349 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 NRN1LQ496H8 165 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 C10orf128Q5T292 105 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 RINLQ6ZS11 566 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 SKA3Q8IX90 412 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 FBXL14Q8N1E6 418 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 SLC22A24Q8N4F4 322 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 SYT14Q8NB59 555 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 IL17RDQ8NFM7 739 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 OR13C2Q8NGS9 318 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 OR51A7Q8NH64 312 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 ZNF519Q8TB69 540 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 HDAC2Q92769 488 aaKnown RBP13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 TRMT61AQ96FX7 289 aaKnown RBP13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 Q96MF0 132 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 KCNK17Q96T54 332 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 IL1RAPQ9NPH3 570 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 ACTR3BQ9P1U1 418 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 TMEM5Q9Y2B1 443 aa13.41□□□□□ -0.26
ECHDC2-223ENST00000542552 ARFGEF3Q5TH69 2177 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 IGHV2OR16-5A0A0B4J2B6 119 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 PTP4A3O75365 173 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 IGHV4-39P01824 125 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 CAPZA2P47755 286 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 OMPP47874 163 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 CTXN1P60606 82 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 SEC23BQ15437 767 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 ETFDHQ16134 617 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 SWI5Q1ZZU3 235 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 MST1LQ2TV78 715 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 ZBED5Q49AG3 693 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 RRM2BQ7LG56 351 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 OR4F15Q8NGB8 312 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 FGFBP3Q8TAT2 258 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 GTPBP3Q969Y2 492 aaKnown RBP13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 KCNS3Q9BQ31 491 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 C1orf21Q9H246 121 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 SMURF2Q9HAU4 748 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 CA10Q9NS85 328 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 ZNF346Q9UL40 294 aaKnown RBP13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 UGT2A1Q9Y4X1 527 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 V9GYQ6 96 aa13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 NSD1Q96L73 2696 aaPredicted RBP13.4□□□□□ -0.26
ECHDC2-223ENST00000542552 SH3PXD2BA1X283 911 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 NDUFS7O75251 213 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 ENTPD5O75356 428 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 UBL3O95164 117 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 OR8G3PP0DMU2 310 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 CD79AP11912 226 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 ATP6V1B2P21281 511 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 SMIM11AP58511 58 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 RAB1AP62820 205 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 MYBPC1Q00872 1141 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 PIGFQ07326 219 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 FGD3Q5JSP0 725 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 FAM205BPQ63HN1 556 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 SLC25A47Q6Q0C1 308 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 DNM1P46Q6ZS02 220 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 IGFN1Q86VF2 1251 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 NUP37Q8NFH4 326 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 OR4K5Q8NGD3 323 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 NANOS1Q8WY41 292 aaKnown RBP13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 MS4A3Q96HJ5 214 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 FAM46AQ96IP4 442 aaKnown RBP13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 C18orf12Q96KH6 178 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 COX4I2Q96KJ9 171 aa13.39□□□□□ -0.27
ECHDC2-223ENST00000542552 TSPAN32Q96QS1 320 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms