RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 RAMP1O60894 148 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 BCL10O95999 233 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 PYCR1P32322 319 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 PTGS2P35354 604 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 RUNX1T1Q06455 604 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 GGTLC2Q14390 218 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 C3AR1Q16581 482 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 VASNQ6EMK4 673 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 TMEM225Q6GV28 225 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 OR5M9Q8NGP3 310 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 OR6K6Q8NGW6 343 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 TXNDC15Q96J42 360 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 ZNF649Q9BS31 505 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 SRA1Q9HD15 236 aaKnown RBP24.75■■□□□ 1.55
CCM2-218ENST00000541586 MED29Q9NX70 200 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 NOX1Q9Y5S8 564 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 C12orf71A8MTZ7 269 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 FAM171A2A8MVW0 826 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 SEC14L5O43304 696 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 EIF1BO60739 113 aaKnown RBP24.75■■□□□ 1.55
CCM2-218ENST00000541586 TRMUO75648 421 aaKnown RBP24.75■■□□□ 1.55
CCM2-218ENST00000541586 GLCEO94923 617 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 ACTL6AO96019 429 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 HSMCR30P0CW71 290 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 SPHARQ15513 63 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 IGFBP7Q16270 282 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 CNPY1Q3B7I2 92 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 LINC01590Q5TEZ4 76 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 FGD2Q7Z6J4 655 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 GPAT4Q86UL3 456 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 UEVLDQ8IX04 471 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 OR6V1Q8N148 313 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 ACBD7Q8N6N7 88 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 OR2T4Q8NH00 348 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 SARAFQ96BY9 339 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 YIPF6Q96EC8 236 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 ALG12Q9BV10 488 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 ERVK13-1Q9NX77 482 aa24.75■■□□□ 1.55
CCM2-218ENST00000541586 VSX1Q9NZR4 365 aaPredicted RBP24.75■■□□□ 1.55
CCM2-218ENST00000541586 TMEM129A0AVI4 362 aa24.74■■□□□ 1.55
CCM2-218ENST00000541586 A6NIZ1 184 aa24.74■■□□□ 1.55
CCM2-218ENST00000541586 LINC01387J3KSC0 135 aa24.74■■□□□ 1.55
CCM2-218ENST00000541586 EIF1AYO14602 144 aaKnown RBP24.74■■□□□ 1.55
CCM2-218ENST00000541586 ABOP16442 354 aa24.74■■□□□ 1.55
CCM2-218ENST00000541586 LIPAP38571 399 aa24.74■■□□□ 1.55
CCM2-218ENST00000541586 RAP1BP61224 184 aa24.74■■□□□ 1.55
CCM2-218ENST00000541586 RAP1AP62834 184 aa24.74■■□□□ 1.55
CCM2-218ENST00000541586 ARMCX4Q5H9R4 360 aa24.74■■□□□ 1.55
CCM2-218ENST00000541586 WDFY1Q8IWB7 410 aa24.74■■□□□ 1.55
CCM2-218ENST00000541586 ZNF420Q8TAQ5 688 aaPredicted RBP24.74■■□□□ 1.55
CCM2-218ENST00000541586 OXGR1Q96P68 337 aa24.74■■□□□ 1.55
CCM2-218ENST00000541586 MGLLQ99685 303 aa24.74■■□□□ 1.55
CCM2-218ENST00000541586 NUAK2Q9H093 628 aa24.74■■□□□ 1.55
CCM2-218ENST00000541586 MOKQ9UQ07 419 aa24.74■■□□□ 1.55
CCM2-218ENST00000541586 ALPK2Q86TB3 2170 aa24.74■■□□□ 1.55
CCM2-218ENST00000541586 ZGRF1Q86YA3 2104 aa24.73■■□□□ 1.55
CCM2-218ENST00000541586 LHX2P50458 406 aa24.73■■□□□ 1.55
CCM2-218ENST00000541586 OR2G6Q5TZ20 316 aa24.73■■□□□ 1.55
CCM2-218ENST00000541586 ESPNLQ6ZVH7 1005 aa24.73■■□□□ 1.55
CCM2-218ENST00000541586 POMGNT2Q8NAT1 580 aa24.73■■□□□ 1.55
CCM2-218ENST00000541586 OR10H4Q8NGA5 316 aa24.73■■□□□ 1.55
CCM2-218ENST00000541586 ADGRG7Q96K78 797 aa24.73■■□□□ 1.55
CCM2-218ENST00000541586 CNN2Q99439 309 aaKnown RBP24.73■■□□□ 1.55
CCM2-218ENST00000541586 TBX5Q99593 518 aa24.73■■□□□ 1.55
CCM2-218ENST00000541586 SRXN1Q9BYN0 137 aa24.73■■□□□ 1.55
CCM2-218ENST00000541586 CAMK2AQ9UQM7 478 aa24.73■■□□□ 1.55
CCM2-218ENST00000541586 LOC102725191A0A1B0GVB3 256 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 SLC22A23A1A5C7 686 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 TPOP07202 933 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 SUCLG1P53597 346 aaKnown RBP24.72■■□□□ 1.55
CCM2-218ENST00000541586 C1DQ13901 141 aaKnown RBP24.72■■□□□ 1.55
CCM2-218ENST00000541586 EEF1A1P5Q5VTE0 462 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 FAM205BPQ63HN1 556 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 LYPD4Q6UWN0 246 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 ST6GALNAC3Q8NDV1 305 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 SMAP2Q8WU79 429 aaPredicted RBP24.72■■□□□ 1.55
CCM2-218ENST00000541586 RASD1Q9Y272 281 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 GTF3C1Q12789 2109 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 SHANK1Q9Y566 2161 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 ZNF701M0R085 212 aaPredicted RBP24.72■■□□□ 1.55
CCM2-218ENST00000541586 TRAF3IP2O43734 574 aaPredicted RBP24.72■■□□□ 1.55
CCM2-218ENST00000541586 TGFBR2P37173 567 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 CD79BP40259 229 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 TMBIM6P55061 237 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 BIDP55957 195 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 WNT4P56705 351 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 RAC3P60763 192 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 HBMQ6B0K9 141 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 NMD3Q96D46 503 aaKnown RBP24.72■■□□□ 1.55
CCM2-218ENST00000541586 UCN2Q96RP3 112 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 DOK1Q99704 481 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 NAA11Q9BSU3 229 aaPredicted RBP24.72■■□□□ 1.55
CCM2-218ENST00000541586 RERGLQ9H628 205 aa24.72■■□□□ 1.55
CCM2-218ENST00000541586 RP1L1Q8IWN7 2480 aaPredicted RBP24.72■■□□□ 1.55
CCM2-218ENST00000541586 IGHV3-15A0A0B4J1V0 119 aa24.71■■□□□ 1.55
CCM2-218ENST00000541586 DAPL1A0PJW8 107 aa24.71■■□□□ 1.55
CCM2-218ENST00000541586 OR14I1A6ND48 311 aa24.71■■□□□ 1.55
CCM2-218ENST00000541586 DNPH1O43598 174 aa24.71■■□□□ 1.55
CCM2-218ENST00000541586 TFP02787 698 aa24.71■■□□□ 1.55
CCM2-218ENST00000541586 NAA10P41227 235 aaPredicted RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms