RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 IFNA6P05013 189 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 FGF2P09038 288 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 PAEPP09466 180 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 CTXN2P0C2S0 81 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 OR4Q2P0C623 313 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 UCHL3P15374 230 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 NR4A1P22736 598 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 LMO2P25791 158 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 GABRR2P28476 465 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 CD79BP40259 229 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 AQP2P41181 271 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 SLC1A1P43005 524 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 OR1D5P58170 312 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 RPS18P62269 152 aaKnown RBP4.8□□□□□ -1.64
DDB1-219ENST00000541513 BLOC1S1P78537 153 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 NTHL1P78549 312 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 MRPS25P82663 173 aaKnown RBP4.8□□□□□ -1.64
DDB1-219ENST00000541513 PAX2Q02962 417 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 TSPAN31Q12999 210 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 PDK2Q15119 407 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 TNXAQ16473 311 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 ISXQ2M1V0 245 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 PAPPA-AS1Q5QFB9 102 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 PDSS1Q5T2R2 415 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 CCNJQ5T5M9 372 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 HES5Q5TA89 166 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 REEP3Q6NUK4 255 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 STEAP1BQ6NZ63 245 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 CERS6Q6ZMG9 384 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 Q6ZNX1 250 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 ZNF546Q86UE3 836 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 ERICH1Q86X53 443 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 TRAM1L1Q8N609 369 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.8□□□□□ -1.64
DDB1-219ENST00000541513 VN1R2Q8NFZ6 395 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 OR52I1Q8NGK6 324 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 OR52N1Q8NH53 320 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 MCOLN3Q8TDD5 553 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 GPR148Q8TDV2 347 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 SETD7Q8WTS6 366 aaKnown RBP4.8□□□□□ -1.64
DDB1-219ENST00000541513 SMAP2Q8WU79 429 aaPredicted RBP4.8□□□□□ -1.64
DDB1-219ENST00000541513 DLX4Q92988 240 aaPredicted RBP4.8□□□□□ -1.64
DDB1-219ENST00000541513 UBE2E3Q969T4 207 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 DACT3Q96B18 629 aaPredicted RBP4.8□□□□□ -1.64
DDB1-219ENST00000541513 SERPINB11Q96P15 392 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 MAPKAP1Q9BPZ7 522 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 ELOVL4Q9GZR5 314 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 C1orf198Q9H425 327 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 KIR3DX1Q9H7L2 352 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 POPDC2Q9HBU9 364 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 UBE2TQ9NPD8 197 aaPredicted RBP4.8□□□□□ -1.64
DDB1-219ENST00000541513 CISHQ9NSE2 258 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 GALPQ9UBC7 116 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 ABCD2Q9UBJ2 740 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 DNAJC12Q9UKB3 198 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 RNF114Q9Y508 228 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 BDP1A6H8Y1 2624 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 A0A0C4DFX4 3053 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 TCF20Q9UGU0 1960 aaKnown RBP4.8□□□□□ -1.64
DDB1-219ENST00000541513 A0A0G2JK05 382 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 ZCWPW2A0A1B0GU75 182 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 MYBPHLA2RUH7 354 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 FAM74A7A6NL05 159 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 CENPXA8MT69 81 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 A8MVM7 634 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 TMEM114B3SHH9 223 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 LMO7DNF2Z398 122 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 F8VP50 259 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 G3V4G9 280 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 EPHB6O15197 1021 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 LAMTOR5O43504 91 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 HCRTO43612 131 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 KIAA0513O60268 411 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 NOS1APO75052 506 aaPredicted RBP4.79□□□□□ -1.64
DDB1-219ENST00000541513 ENTPD5O75356 428 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 JTBO76095 146 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 OXSR1O95747 527 aaPredicted RBP4.79□□□□□ -1.64
DDB1-219ENST00000541513 FGF19O95750 216 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 LATS1O95835 1130 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 TSPAN13O95857 204 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 P04436 131 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 SP1P08047 785 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 NR2C1P13056 603 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 GATA1P15976 413 aaPredicted RBP4.79□□□□□ -1.64
DDB1-219ENST00000541513 XRCC1P18887 633 aaPredicted RBP4.79□□□□□ -1.64
DDB1-219ENST00000541513 G0S2P27469 103 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 CFPP27918 469 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 SERPINB1P30740 379 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 ACTR1BP42025 376 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 MAGEA2P43356 314 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 ALDH3B2P48448 385 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 CX3CR1P49238 355 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 KLK7P49862 253 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 CCR8P51685 355 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 ARPP19P56211 112 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 B3GALT5-AS1P59052 145 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 ACTBP60709 375 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 ACTA2P62736 377 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 ACTG1P63261 375 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 ACTG2P63267 376 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms