RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 HPP00738 406 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 APOC1P02654 83 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 H2AFB1P0C5Y9 115 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 LIPCP11150 499 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 CCL4P13236 92 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 APEHP13798 732 aaKnown RBP9.47□□□□□ -0.89
CHFR-219ENST00000541341 ATF1P18846 271 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 SLC2A5P22732 501 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 EDNRAP25101 427 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 ATP5A1P25705 553 aaKnown RBP9.47□□□□□ -0.89
CHFR-219ENST00000541341 SRP9P49458 86 aaKnown RBP9.47□□□□□ -0.89
CHFR-219ENST00000541341 PPM1FP49593 454 aaPredicted RBP9.47□□□□□ -0.89
CHFR-219ENST00000541341 VEGFCP49767 419 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 OR1D5P58170 312 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 ZP1P60852 638 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 PRPS1P60891 318 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 RPS15AP62244 130 aaKnown RBP9.47□□□□□ -0.89
CHFR-219ENST00000541341 CSNK1G2P78368 415 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 CYCSP99999 105 aaKnown RBP9.47□□□□□ -0.89
CHFR-219ENST00000541341 MEF2AQ02078 507 aaPredicted RBP9.47□□□□□ -0.89
CHFR-219ENST00000541341 SRSF4Q08170 494 aaKnown RBP9.47□□□□□ -0.89
CHFR-219ENST00000541341 CRYZQ08257 329 aaKnown RBP9.47□□□□□ -0.89
CHFR-219ENST00000541341 DBPQ10586 325 aaPredicted RBP9.47□□□□□ -0.89
CHFR-219ENST00000541341 PABPC1L2AQ5JQF8 200 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 EIF5AL1Q6IS14 154 aaKnown RBP9.47□□□□□ -0.89
CHFR-219ENST00000541341 MFSD12Q6NUT3 480 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 ABHD17CQ6PCB6 329 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 C11orf88Q6PI97 169 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 SKA3Q8IX90 412 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 ZNF440Q8IYI8 595 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 CMTM4Q8IZR5 234 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 ARMC10Q8N2F6 343 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 ACOT4Q8N9L9 421 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 MFSD9Q8NBP5 474 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 ZNF740Q8NDX6 193 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 OR4K14Q8NGD5 310 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 COQ8AQ8NI60 647 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 RPS4Y2Q8TD47 263 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 GPR148Q8TDV2 347 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 TNFAIP8L1Q8WVP5 186 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 PATE1Q8WXA2 126 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 UQCC2Q9BRT2 126 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 TCEAL7Q9BRU2 100 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 B3GNT4Q9C0J1 378 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 MFFQ9GZY8 342 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 COMMD4Q9H0A8 199 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 OR10A4Q9H209 315 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 MRPS30Q9NP92 439 aaKnown RBP9.47□□□□□ -0.89
CHFR-219ENST00000541341 HPF1Q9NWY4 346 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 NKIRAS2Q9NYR9 191 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 LRIT1Q9P2V4 623 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 ZMAT5Q9UDW3 170 aaKnown RBP9.47□□□□□ -0.89
CHFR-219ENST00000541341 EPHA6Q9UF33 1036 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 MLXQ9UH92 298 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 OPN4Q9UHM6 478 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 PURGQ9UJV8 347 aaKnown RBP9.47□□□□□ -0.89
CHFR-219ENST00000541341 SIGLEC7Q9Y286 467 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 PRKAB1Q9Y478 270 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 CHST2Q9Y4C5 530 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 PLEKHM1Q9Y4G2 1056 aa9.47□□□□□ -0.89
CHFR-219ENST00000541341 SLC22A23A1A5C7 686 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 METTL21EPA6NDL7 271 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 C9orf172C9J069 976 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 H3BUI4 141 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 H7C417 338 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 ARPC3O15145 178 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 CDC40O60508 579 aaKnown RBP eCLIP9.46□□□□□ -0.9
CHFR-219ENST00000541341 CTNSO60931 367 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 CDC123O75794 336 aaPredicted RBP9.46□□□□□ -0.9
CHFR-219ENST00000541341 TFPIP10646 304 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 SLC25A4P12235 298 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 SNRPBP14678 240 aaKnown RBP9.46□□□□□ -0.9
CHFR-219ENST00000541341 DRD5P21918 477 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 RPS4Y1P22090 263 aaKnown RBP9.46□□□□□ -0.9
CHFR-219ENST00000541341 DIO1P49895 249 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 SELENOPP49908 381 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 EEF1A1P68104 462 aaKnown RBP9.46□□□□□ -0.9
CHFR-219ENST00000541341 ZNF85Q03923 595 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 RASGEF1BQ0VAM2 473 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 FUT5Q11128 374 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 OR1Q1Q15612 314 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 FAM189A2Q15884 450 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 TBR1Q16650 682 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 Q499Y3 187 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 NKAPLQ5M9Q1 402 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 PDSS1Q5T2R2 415 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 NKAIN2Q5VXU1 208 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 SFRP4Q6FHJ7 346 aaPredicted RBP9.46□□□□□ -0.9
CHFR-219ENST00000541341 FAHD2BQ6P2I3 314 aaPredicted RBP9.46□□□□□ -0.9
CHFR-219ENST00000541341 OGFOD3Q6PK18 319 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 DPY19L2P2Q6ZN68 376 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 NDUFAF7Q7L592 441 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 NUP54Q7Z3B4 507 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 NR2C2APQ86WQ0 139 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 C17orf82Q86X59 251 aaPredicted RBP9.46□□□□□ -0.9
CHFR-219ENST00000541341 VRK2Q86Y07 508 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 LURAP1LQ8IV03 231 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 NKAIN4Q8IVV8 208 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 SLC35F2Q8IXU6 374 aa9.46□□□□□ -0.9
CHFR-219ENST00000541341 CCDC116Q8IYX3 515 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms