RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 SWT1Q5T5J6 900 aaKnown RBP22.83■■□□□ 1.25
CHFR-218ENST00000540963 AVPI1Q5T686 147 aa22.83■■□□□ 1.25
CHFR-218ENST00000540963 TREML1Q86YW5 311 aa22.83■■□□□ 1.25
CHFR-218ENST00000540963 WDFY1Q8IWB7 410 aa22.83■■□□□ 1.25
CHFR-218ENST00000540963 OR6X1Q8NH79 312 aa22.83■■□□□ 1.25
CHFR-218ENST00000540963 RAB1CQ92928 201 aa22.83■■□□□ 1.25
CHFR-218ENST00000540963 TMEM54Q969K7 222 aa22.83■■□□□ 1.25
CHFR-218ENST00000540963 MAL2Q969L2 176 aa22.83■■□□□ 1.25
CHFR-218ENST00000540963 MOGAT1Q96PD6 335 aa22.83■■□□□ 1.25
CHFR-218ENST00000540963 RSPO3Q9BXY4 272 aaPredicted RBP22.83■■□□□ 1.25
CHFR-218ENST00000540963 BCL2L14Q9BZR8 327 aa22.83■■□□□ 1.25
CHFR-218ENST00000540963 EVA1AQ9H8M9 152 aa22.83■■□□□ 1.25
CHFR-218ENST00000540963 TMEM27Q9HBJ8 222 aa22.83■■□□□ 1.25
CHFR-218ENST00000540963 GLTPQ9NZD2 209 aa22.83■■□□□ 1.25
CHFR-218ENST00000540963 WIPI2Q9Y4P8 454 aa22.83■■□□□ 1.25
CHFR-218ENST00000540963 TRRAPQ9Y4A5 3859 aa22.83■■□□□ 1.24
CHFR-218ENST00000540963 A0A0B4J2E0 115 aa22.82■■□□□ 1.24
CHFR-218ENST00000540963 A0A1B0GX12 115 aa22.82■■□□□ 1.24
CHFR-218ENST00000540963 PRSS23O95084 383 aa22.82■■□□□ 1.24
CHFR-218ENST00000540963 ADRA2CP18825 462 aa22.82■■□□□ 1.24
CHFR-218ENST00000540963 RBBP4Q09028 425 aa22.82■■□□□ 1.24
CHFR-218ENST00000540963 TUSC1Q2TAM9 212 aa22.82■■□□□ 1.24
CHFR-218ENST00000540963 ALKBH6Q3KRA9 238 aa22.82■■□□□ 1.24
CHFR-218ENST00000540963 NXNQ6DKJ4 435 aa22.82■■□□□ 1.24
CHFR-218ENST00000540963 KRT73Q86Y46 540 aa22.82■■□□□ 1.24
CHFR-218ENST00000540963 FGFBP3Q8TAT2 258 aa22.82■■□□□ 1.24
CHFR-218ENST00000540963 C7orf69Q9H7B7 122 aa22.82■■□□□ 1.24
CHFR-218ENST00000540963 CDH20Q9HBT6 801 aa22.82■■□□□ 1.24
CHFR-218ENST00000540963 DECR2Q9NUI1 292 aa22.82■■□□□ 1.24
CHFR-218ENST00000540963 PPIAL4EA0A075B759 164 aa22.81■■□□□ 1.24
CHFR-218ENST00000540963 PPIAL4CA0A0B4J2A2 164 aa22.81■■□□□ 1.24
CHFR-218ENST00000540963 PPIAL4DF5H284 164 aa22.81■■□□□ 1.24
CHFR-218ENST00000540963 FARS2O95363 451 aaKnown RBP22.81■■□□□ 1.24
CHFR-218ENST00000540963 PATE4P0C8F1 98 aa22.81■■□□□ 1.24
CHFR-218ENST00000540963 FAM157BP0CG42 384 aa22.81■■□□□ 1.24
CHFR-218ENST00000540963 PPIAL4FP0DN26 164 aa22.81■■□□□ 1.24
CHFR-218ENST00000540963 AHCYP23526 432 aa22.81■■□□□ 1.24
CHFR-218ENST00000540963 POLR2JP52435 117 aaKnown RBP22.81■■□□□ 1.24
CHFR-218ENST00000540963 ZP4Q12836 540 aa22.81■■□□□ 1.24
CHFR-218ENST00000540963 HFEQ30201 348 aa22.81■■□□□ 1.24
CHFR-218ENST00000540963 NRN1LQ496H8 165 aa22.81■■□□□ 1.24
CHFR-218ENST00000540963 RETREG3Q86VR2 466 aa22.81■■□□□ 1.24
CHFR-218ENST00000540963 MIER2Q8N344 545 aa22.81■■□□□ 1.24
CHFR-218ENST00000540963 BHLHE22Q8NFJ8 381 aaPredicted RBP22.81■■□□□ 1.24
CHFR-218ENST00000540963 OR1J2Q8NGS2 313 aa22.81■■□□□ 1.24
CHFR-218ENST00000540963 OR5J2Q8NH18 312 aa22.81■■□□□ 1.24
CHFR-218ENST00000540963 RNF217Q8TC41 542 aa22.81■■□□□ 1.24
CHFR-218ENST00000540963 GTF2H4Q92759 462 aa22.81■■□□□ 1.24
CHFR-218ENST00000540963 PAIP1Q9H074 479 aaKnown RBP22.81■■□□□ 1.24
CHFR-218ENST00000540963 ZMAT3Q9HA38 289 aaKnown RBP22.81■■□□□ 1.24
CHFR-218ENST00000540963 TMEM38BQ9NVV0 291 aa22.81■■□□□ 1.24
CHFR-218ENST00000540963 HOXB9P17482 250 aaPredicted RBP22.8■■□□□ 1.24
CHFR-218ENST00000540963 UCP2P55851 309 aa22.8■■□□□ 1.24
CHFR-218ENST00000540963 BIDP55957 195 aa22.8■■□□□ 1.24
CHFR-218ENST00000540963 PDLIM3Q53GG5 364 aaPredicted RBP22.8■■□□□ 1.24
CHFR-218ENST00000540963 TMEM53Q6P2H8 277 aa22.8■■□□□ 1.24
CHFR-218ENST00000540963 EPGNQ6UW88 154 aa22.8■■□□□ 1.24
CHFR-218ENST00000540963 WDR88Q6ZMY6 472 aa22.8■■□□□ 1.24
CHFR-218ENST00000540963 USP51Q70EK9 711 aa22.8■■□□□ 1.24
CHFR-218ENST00000540963 COMTD1Q86VU5 262 aa22.8■■□□□ 1.24
CHFR-218ENST00000540963 DVL3Q92997 716 aaPredicted RBP22.8■■□□□ 1.24
CHFR-218ENST00000540963 TSPAN32Q96QS1 320 aa22.8■■□□□ 1.24
CHFR-218ENST00000540963 LRMDAQ9H2I8 198 aa22.8■■□□□ 1.24
CHFR-218ENST00000540963 NKIRAS1Q9NYS0 192 aa22.8■■□□□ 1.24
CHFR-218ENST00000540963 OPN4Q9UHM6 478 aa22.8■■□□□ 1.24
CHFR-218ENST00000540963 PRORSD1PA6NEY8 169 aa22.79■■□□□ 1.24
CHFR-218ENST00000540963 IGHV3-13P01766 116 aa22.79■■□□□ 1.24
CHFR-218ENST00000540963 LCKP06239 509 aa22.79■■□□□ 1.24
CHFR-218ENST00000540963 ARAFP10398 606 aa22.79■■□□□ 1.24
CHFR-218ENST00000540963 OR1Q1Q15612 314 aa22.79■■□□□ 1.24
CHFR-218ENST00000540963 TBC1D28Q2M2D7 210 aa22.79■■□□□ 1.24
CHFR-218ENST00000540963 REEP3Q6NUK4 255 aa22.79■■□□□ 1.24
CHFR-218ENST00000540963 RBMS3Q6XE24 437 aaKnown RBP22.79■■□□□ 1.24
CHFR-218ENST00000540963 PAQR4Q8N4S7 273 aaPredicted RBP22.79■■□□□ 1.24
CHFR-218ENST00000540963 C10orf53Q8N6V4 93 aa22.79■■□□□ 1.24
CHFR-218ENST00000540963 ELMOD3Q96FG2 381 aa22.79■■□□□ 1.24
CHFR-218ENST00000540963 SAP30LQ9HAJ7 183 aa22.79■■□□□ 1.24
CHFR-218ENST00000540963 TGP01266 2768 aa22.79■■□□□ 1.24
CHFR-218ENST00000540963 MGRN1O60291 552 aa22.78■■□□□ 1.24
CHFR-218ENST00000540963 MFN2O95140 757 aa22.78■■□□□ 1.24
CHFR-218ENST00000540963 ADORA3P0DMS8 318 aa22.78■■□□□ 1.24
CHFR-218ENST00000540963 RGS8P57771 180 aaPredicted RBP22.78■■□□□ 1.24
CHFR-218ENST00000540963 SLC36A2Q495M3 483 aa22.78■■□□□ 1.24
CHFR-218ENST00000540963 GOLGA6L1Q8N7Z2 621 aa22.78■■□□□ 1.24
CHFR-218ENST00000540963 ZNF566Q969W8 418 aa22.78■■□□□ 1.24
CHFR-218ENST00000540963 SLC25A44Q96H78 314 aaPredicted RBP22.78■■□□□ 1.24
CHFR-218ENST00000540963 ARHGAP32A7KAX9 2087 aa22.78■■□□□ 1.24
CHFR-218ENST00000540963 UBDO15205 165 aa22.77■■□□□ 1.24
CHFR-218ENST00000540963 DHHO43323 396 aa22.77■■□□□ 1.24
CHFR-218ENST00000540963 TPD52L2O43399 206 aaKnown RBP22.77■■□□□ 1.24
CHFR-218ENST00000540963 TPST1O60507 370 aa22.77■■□□□ 1.24
CHFR-218ENST00000540963 OR6A2O95222 327 aa22.77■■□□□ 1.24
CHFR-218ENST00000540963 SLC3A1Q07837 685 aa22.77■■□□□ 1.24
CHFR-218ENST00000540963 LRFN4Q6PJG9 635 aa22.77■■□□□ 1.24
CHFR-218ENST00000540963 SLC35D2Q76EJ3 337 aa22.77■■□□□ 1.24
CHFR-218ENST00000540963 NFKBIDQ8NI38 313 aa22.77■■□□□ 1.24
CHFR-218ENST00000540963 SH3GL3Q99963 347 aa22.77■■□□□ 1.24
CHFR-218ENST00000540963 RNF121Q9H920 327 aa22.77■■□□□ 1.24
CHFR-218ENST00000540963 SLCO1B3Q9NPD5 702 aa22.77■■□□□ 1.24
CHFR-218ENST00000540963 PPIAL4AQ9Y536 164 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms