RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 ZNF846Q147U1 533 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 ACKR1Q16570 336 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 C3orf33Q6P1S2 294 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 SSX6Q7RTT6 188 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 RFLNBQ8N5W9 214 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 TMEM203Q969S6 136 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 ZBTB8AQ96BR9 441 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 JSRP1Q96MG2 331 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-204ENST00000540846 UBL7Q96S82 380 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-204ENST00000540846 TM9SF2Q99805 663 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 OR2B2Q9GZK3 357 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 TXNIPQ9H3M7 391 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 ALKBH4Q9NXW9 302 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 TUBD1Q9UJT1 453 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 ZNF407Q9C0G0 2248 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 KIAA1549Q9HCM3 1950 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 ATRXP46100 2492 aa11.17□□□□□ -0.62
SMAD3-204ENST00000540846 KLRC4-KLRK1H3BQV0 150 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 XKRYO14609 159 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 LRRTM2O43300 516 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 HLA-DPB1P04440 258 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 IMPDH2P12268 514 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 BMP4P12644 408 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 DPP4P27487 766 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 GTF2E2P29084 291 aaKnown RBP11.16□□□□□ -0.62
SMAD3-204ENST00000540846 PMP22Q01453 160 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 PUDPQ08623 228 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 SELENBP1Q13228 472 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 ZNF169Q14929 603 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-204ENST00000540846 OR7A5Q15622 319 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 CDONQ4KMG0 1287 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 EEF1A1P5Q5VTE0 462 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 C22orf42Q6IC83 251 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 H1FNTQ75WM6 255 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-204ENST00000540846 VASH1Q7L8A9 365 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-204ENST00000540846 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-204ENST00000540846 GTPBP8Q8N3Z3 284 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-204ENST00000540846 TMEM251Q8N6I4 163 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 SMAP2Q8WU79 429 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-204ENST00000540846 SLC25A43Q8WUT9 341 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-204ENST00000540846 MRPL48Q96GC5 212 aaKnown RBP11.16□□□□□ -0.62
SMAD3-204ENST00000540846 KCTD7Q96MP8 289 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 MED18Q9BUE0 208 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 CHST11Q9NPF2 352 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 FANCFQ9NPI8 374 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 SERINC1Q9NRX5 453 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 VSX1Q9NZR4 365 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-204ENST00000540846 LHX6Q9UPM6 363 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 MRPS18CQ9Y3D5 142 aaKnown RBP11.16□□□□□ -0.62
SMAD3-204ENST00000540846 SIRT4Q9Y6E7 314 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-204ENST00000540846 A0A075B6Q4 140 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 A0A1W2PNV4 684 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 PRSS37A4D1T9 235 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 H7C1C5 153 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 DCTN6O00399 190 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 PLGP00747 810 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-204ENST00000540846 HPNP05981 417 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 CELA3AP09093 270 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 TFPIP10646 304 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 AHCYP23526 432 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 FKBP2P26885 142 aaKnown RBP11.16□□□□□ -0.62
SMAD3-204ENST00000540846 RPS19P39019 145 aaKnown RBP11.16□□□□□ -0.62
SMAD3-204ENST00000540846 OR12D2P58182 307 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 LCN6P62502 163 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 MYBPHQ13203 477 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 LYPD4Q6UWN0 246 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 SLC16A9Q7RTY1 509 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 TIGD4Q8IY51 512 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 OR6V1Q8N148 313 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 ADPRHL1Q8NDY3 354 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 FAM83FQ8NEG4 500 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-204ENST00000540846 TSSK2Q96PF2 358 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 TAAR6Q96RI8 345 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 TMED9Q9BVK6 235 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 SYT4Q9H2B2 425 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 MARCH7Q9H992 704 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 COPS3Q9UNS2 423 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 B3GNT3Q9Y2A9 372 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 GSTK1Q9Y2Q3 226 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 FKBP7Q9Y680 259 aa11.16□□□□□ -0.62
SMAD3-204ENST00000540846 DNAJC13O75165 2243 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 A0A1W2PRG6 482 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 OR2M5A3KFT3 312 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 A6NIZ1 184 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 FAM166BA8MTA8 275 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 E9PI62 339 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 MS4A18H0YCH9 400 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 H3BML4 177 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 J3QLW9 94 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 J3QRK9 145 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 GABRPO00591 440 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 ARHGEF9O43307 516 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 PLPP2O43688 288 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 RGS9O75916 674 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-204ENST00000540846 ZNF17P17021 662 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 ZNF19P17023 458 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 ACVR1BP36896 505 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 MAGEA5P43359 124 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 HCCSP53701 268 aa11.15□□□□□ -0.62
SMAD3-204ENST00000540846 RAP1BP61224 184 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms