RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 F8VWA3 439 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 KCNAB3O43448 404 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 GLCEO94923 617 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 KAT7O95251 611 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 PPP1R3DO95685 299 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 CD14P08571 375 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 LINC00614P0C842 121 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 GSTM3P21266 225 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 KIR3DL2P43630 455 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 ATP1B3P54709 279 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 MRPS11P82912 194 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 GLO1Q04760 184 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 ODF4Q2M2E3 257 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 TMEM69Q5SWH9 247 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 GFI1BQ5VTD9 330 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 C22orf39Q6P5X5 142 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 DRAM2Q6UX65 266 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 GDPD4Q6W3E5 623 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 RPTNQ6XPR3 784 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 Q6ZVU0 165 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 C5orf24Q7Z6I8 188 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 GLB1L2Q8IW92 636 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 BPIFB2Q8N4F0 458 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 PNLDC1Q8NA58 520 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 MORN4Q8NDC4 146 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 OR4E2Q8NGC2 313 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 OR2AP1Q8NGE2 309 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 OR5M8Q8NGP6 311 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 OR6N1Q8NGY5 312 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 C1orf216Q8TAB5 229 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 SEC22AQ96IW7 307 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 KIRREL1Q96J84 757 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 PGLYRP3Q96LB9 341 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 C20orf24Q9BUV8 137 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 FNDC11Q9BVV2 318 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 DDA1Q9BW61 102 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 EPHX3Q9H6B9 360 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 A0A1B0GTI1 187 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 SERTM1A2A2V5 107 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 RPL36A-HNRNPH2H7BZ11 118 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 M0R036 132 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 PHOX2AO14813 284 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 AGPAT2O15120 278 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 SURF4O15260 269 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 MAGEB4O15481 346 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 SLC25A14O95258 325 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 BCHEP06276 602 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 SOD3P08294 240 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 ST6GAL1P15907 406 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 MPZP25189 248 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 FAUP35544 74 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 SOAT1P35610 550 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 RPS10P46783 165 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 INSM1Q01101 510 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 PRRT3Q5FWE3 981 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 ENPP7Q6UWV6 458 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 FCRLAQ7L513 359 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 HIST3H2BBQ8N257 126 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 PAQR4Q8N4S7 273 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 INO80EQ8NBZ0 244 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 OR10AD1Q8NGE0 317 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 PIGXQ8TBF5 258 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 GPR148Q8TDV2 347 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 PPP1R1CQ8WVI7 109 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 RGP1Q92546 391 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 NOL4LQ96MY1 436 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 MICU1Q9BPX6 476 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 SNHG12Q9BXW3 62 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 SELENOIQ9C0D9 397 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 EXO5Q9H790 373 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 ARL15Q9NXU5 204 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 FOXJ3Q9UPW0 622 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 CXorf51AA0A1B0GTR3 108 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 A0A1W2PPE2 198 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 DAPL1A0PJW8 107 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 FOXE1O00358 373 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 LDLRAD4O15165 306 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 PRICKLE3O43900 615 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 SLC2A10O95528 541 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 IGSF6O95976 241 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 IL3P08700 152 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 SULT1A1P50225 295 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 ZNF84P51523 738 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 SNRPD1P62314 119 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 RPS15P62841 145 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 IRF8Q02556 426 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 DOC2AQ14183 400 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 PCGF3Q3KNV8 242 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 MAJINQ3KP22 176 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 NDUFAF7Q7L592 441 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 OR2A12Q8NGT7 310 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 OR5R1Q8NH85 324 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 ST7LQ8TDW4 575 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 SECTM1Q8WVN6 248 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 OR8D1Q8WZ84 308 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 GHSRQ92847 366 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 INSM2Q96T92 566 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 BOCQ9BWV1 1114 aa8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 BHLHE41Q9C0J9 482 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-243ENST00000540387 H2AFY2Q9P0M6 372 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms