RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 OR6T1Q8NGN1 323 aa7.96□□□□□ -1.14
DDB1-217ENST00000540166 OR13C5Q8NGS8 318 aa7.96□□□□□ -1.14
DDB1-217ENST00000540166 OR9A1PQ8NGU1 263 aa7.96□□□□□ -1.14
DDB1-217ENST00000540166 RAB40AQ8WXH6 277 aa7.96□□□□□ -1.14
DDB1-217ENST00000540166 GLYATL1Q969I3 302 aa7.96□□□□□ -1.14
DDB1-217ENST00000540166 MCHR1Q99705 422 aa7.96□□□□□ -1.14
DDB1-217ENST00000540166 PIGQQ9BRB3 760 aa7.96□□□□□ -1.14
DDB1-217ENST00000540166 ORAI3Q9BRQ5 295 aa7.96□□□□□ -1.14
DDB1-217ENST00000540166 MEPEQ9NQ76 525 aaPredicted RBP7.96□□□□□ -1.14
DDB1-217ENST00000540166 DMRT3Q9NQL9 472 aa7.96□□□□□ -1.14
DDB1-217ENST00000540166 NDOR1Q9UHB4 597 aa7.96□□□□□ -1.14
DDB1-217ENST00000540166 KCNK6Q9Y257 313 aa7.96□□□□□ -1.14
DDB1-217ENST00000540166 PATJQ8NI35 1801 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 CACNA1AO00555 2505 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 A0A1B0GV90 55 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 TMEM72A0PK05 275 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 MCIDASD6RGH6 385 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 DVL2O14641 736 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 BCL2L11O43521 198 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 OR2T1O43869 369 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 GREM1O60565 184 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 GALR3O60755 368 aaPredicted RBP7.95□□□□□ -1.14
DDB1-217ENST00000540166 RCBTB2O95199 551 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 IGHV4-34P06331 123 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 AKAIN1P0CW23 69 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 TFPIP10646 304 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 MYF5P13349 255 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 NFYBP25208 207 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 PTGER1P34995 402 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 RPS10P46783 165 aaKnown RBP7.95□□□□□ -1.14
DDB1-217ENST00000540166 CBFBQ13951 182 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 PIP5KL1Q5T9C9 394 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 ZNF529Q6P280 563 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 FIGNL1Q6PIW4 674 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 OLIG3Q7RTU3 272 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 MMP21Q8N119 569 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 ACBD4Q8NC06 268 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 OR4D9Q8NGE8 314 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 ZFPM2Q8WW38 1151 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 DCUN1D4Q92564 292 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 RSRP1Q9BUV0 290 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 LGR4Q9BXB1 951 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 CXorf36Q9H7Y0 433 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 MED17Q9NVC6 651 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 DSPPQ9NZW4 1301 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 TAC3Q9UHF0 121 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 KCND3Q9UK17 655 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 CHD7Q9P2D1 2997 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 SLC25A12O75746 678 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 MAGEB1P43366 347 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 OR12D2P58182 307 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 RPE65Q16518 533 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 C1orf94Q6P1W5 598 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 SLCO4C1Q6ZQN7 724 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 ACOT7LQ6ZUV0 252 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 TECPR1Q7Z6L1 1165 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 TMEM99Q8N816 258 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 CA5BP1Q8WTZ4 195 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 MEGF10Q96KG7 1140 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 SYT4Q9H2B2 425 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 ZCCHC4Q9H5U6 513 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 HINT3Q9NQE9 182 aaKnown RBP7.95□□□□□ -1.14
DDB1-217ENST00000540166 NPDC1Q9NQX5 325 aaPredicted RBP7.95□□□□□ -1.14
DDB1-217ENST00000540166 V9GY05 133 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 GREB1Q4ZG55 1949 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 A0A087WUU8 490 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 SPTY2D1-AS1A0A0U1RR47 76 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 TMEM82A0PJX8 343 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 ZNF729A6NN14 1252 aaPredicted RBP7.95□□□□□ -1.14
DDB1-217ENST00000540166 NUDT19A8MXV4 375 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 KDM4EB2RXH2 506 aaPredicted RBP7.95□□□□□ -1.14
DDB1-217ENST00000540166 AMY2AP04746 511 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 IFNA6P05013 189 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 DRD3P35462 400 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 RPL4P36578 427 aaKnown RBP7.95□□□□□ -1.14
DDB1-217ENST00000540166 LIMS1P48059 325 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 NPBWR1P48145 328 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 NCBP2P52298 156 aaKnown RBP eCLIP7.95□□□□□ -1.144e-6■□□□□ 8.1
DDB1-217ENST00000540166 CEBPGP53567 150 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 PPIAP62937 165 aaKnown RBP7.95□□□□□ -1.14
DDB1-217ENST00000540166 MAT1AQ00266 395 aaKnown RBP7.95□□□□□ -1.14
DDB1-217ENST00000540166 ALKBH1Q13686 389 aaKnown RBP7.95□□□□□ -1.14
DDB1-217ENST00000540166 KIAA0141Q14154 515 aaPredicted RBP7.95□□□□□ -1.14
DDB1-217ENST00000540166 ZXDCQ2QGD7 858 aaPredicted RBP7.95□□□□□ -1.14
DDB1-217ENST00000540166 SLC25A30Q5SVS4 291 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 OR52W1Q6IF63 320 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 ZNF585AQ6P3V2 769 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 NXPE4Q6UWF7 544 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 ZNF627Q7L945 461 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 ZNF227Q86WZ6 799 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 ZNF565Q8N9K5 539 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 CYB561A3Q8NBI2 242 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 OR6K6Q8NGW6 343 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 TMED6Q8WW62 240 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 OR14A2Q96R54 314 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 PIPOXQ9P0Z9 390 aa7.95□□□□□ -1.14
DDB1-217ENST00000540166 TRAV18A0A075B6X5 111 aa7.94□□□□□ -1.14
DDB1-217ENST00000540166 A0A0B4J2A0 478 aa7.94□□□□□ -1.14
DDB1-217ENST00000540166 RPP14O95059 124 aaKnown RBP7.94□□□□□ -1.14
DDB1-217ENST00000540166 SLC2A10O95528 541 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms