RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 CACYBPQ9HB71 228 aaKnown RBP9.85□□□□□ -0.83
CLSTN3-209ENST00000539982 CDH20Q9HBT6 801 aa9.85□□□□□ -0.83
CLSTN3-209ENST00000539982 SSU72Q9NP77 194 aaKnown RBP9.85□□□□□ -0.83
CLSTN3-209ENST00000539982 UBAP1Q9NZ09 502 aa9.85□□□□□ -0.83
CLSTN3-209ENST00000539982 TESQ9UGI8 421 aaKnown RBP9.85□□□□□ -0.83
CLSTN3-209ENST00000539982 CMYA5Q8N3K9 4069 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 IGKV1D-42A0A075B6H8 117 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 A0A1B0GUS0 222 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 ISPDA4D126 451 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 ENTPD5O75356 428 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 SPAG7O75391 227 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 UBOX5O94941 541 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 SNAP29O95721 258 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 IGHV3-13P01766 116 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 BPGMP07738 259 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 CCL2P13500 99 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 ETFAP13804 333 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 LBPP18428 481 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 MAKP20794 623 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 DRD4P21917 467 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 CRATP43155 626 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 ZNF81P51508 661 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 NME5P56597 212 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 UFM1P61960 85 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 PDCD4Q53EL6 469 aaKnown RBP9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 RPS26P11Q5JNZ5 115 aaPredicted RBP9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 C16orf87Q6PH81 154 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 PXKQ7Z7A4 578 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 ZNF781Q8N8C0 355 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 LSMEM1Q8N8F7 131 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 SCAIQ8N9R8 606 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 OR1J2Q8NGS2 313 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 DNAJA4Q8WW22 397 aaPredicted RBP9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 GTF3AQ92664 365 aaKnown RBP9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 ASPNQ9BXN1 380 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 MS4A7Q9GZW8 240 aaPredicted RBP9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 LRMDAQ9H2I8 198 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 C1orf198Q9H425 327 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 KCNK9Q9NPC2 374 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 TCF7L2Q9NQB0 619 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 PDP1Q9P0J1 537 aaPredicted RBP9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 KLHL14Q9P2G3 628 aa9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 POLR3KQ9Y2Y1 108 aaPredicted RBP9.84□□□□□ -0.83
CLSTN3-209ENST00000539982 A0A1B0GWA3 101 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 TMEM120BA0PK00 339 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 TRAPPC2LH3BP13 241 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 ITM2AO43736 263 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 KNG1P01042 644 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 PTHP01270 115 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 IGHV1-46P01743 117 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 IGHMP01871 453 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 ZNF12P17014 697 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 OMGP23515 440 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 IL12AP29459 219 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 PCGF2P35227 344 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 MTNR1AP48039 350 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 CSNK1A1P48729 337 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 SLC18A1P54219 525 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 GYS2P54840 703 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 DSTNP60981 165 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 SRSF4Q08170 494 aaKnown RBP9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 PUDPQ08623 228 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 PMS2P3Q13401 168 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 TBC1D28Q2M2D7 210 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 TMEM53Q6P2H8 277 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 WDR88Q6ZMY6 472 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 DPPA2Q7Z7J5 298 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 ICA1LQ8NDH6 482 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 CPEB3Q8NE35 698 aaKnown RBP9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 TMEM54Q969K7 222 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 TMEM19Q96HH6 336 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 PKP2Q99959 881 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 SH3GL3Q99963 347 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 MRI1Q9BV20 369 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 MMP27Q9H306 513 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 RNF121Q9H920 327 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 THUMPD1Q9NXG2 353 aaKnown RBP9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 NKIRAS1Q9NYS0 192 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 INSIG2Q9Y5U4 225 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 GPR45Q9Y5Y3 372 aa9.83□□□□□ -0.84
CLSTN3-209ENST00000539982 WNK1Q9H4A3 2382 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 TMEM247A6NEH6 219 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 PLPP3O14495 311 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 RFXANKO14593 260 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 TM9SF1O15321 606 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 SPRY3O43610 288 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 TYROBPO43914 113 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 MFN2O95140 757 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 FARS2O95363 451 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 BGLAPP02818 100 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 SBK2P0C263 348 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 AHCYP23526 432 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 SLC6A9P48067 706 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 RPL14P50914 215 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 MMP15P51511 669 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 GLO1Q04760 184 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 ALG10BQ5I7T1 473 aa9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 ZNF362Q5T0B9 420 aaPredicted RBP9.82□□□□□ -0.84
CLSTN3-209ENST00000539982 ULK3Q6PHR2 472 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms