RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ZNF14P17017 642 aaPredicted RBP11.5□□□□□ -0.57
DDX55-206ENST00000539934 ZFP36L2P47974 494 aaKnown RBP11.5□□□□□ -0.57
DDX55-206ENST00000539934 ITGA1P56199 1179 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 FOXM1Q08050 763 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 TSTA3Q13630 321 aaPredicted RBP11.5□□□□□ -0.57
DDX55-206ENST00000539934 CLINT1Q14677 625 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 RNF151Q2KHN1 245 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 BSXQ3C1V8 233 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 XKR6Q5GH73 641 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 SPATA46Q5T0L3 261 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 TTC23Q5W5X9 447 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 LYSMD4Q5XG99 296 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 FOXRED2Q8IWF2 684 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 SULF2Q8IWU5 870 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 OR8J1Q8NGP2 316 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 ADIPOR1Q96A54 375 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 LRRC58Q96CX6 371 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 C12orf66Q96MD2 445 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 TGM7Q96PF1 710 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 MS4A4EQ96PG1 132 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 SLC52A3Q9NQ40 469 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 ZNF701Q9NV72 531 aaPredicted RBP11.5□□□□□ -0.57
DDX55-206ENST00000539934 MGAT4CQ9UBM8 478 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 MRTO4Q9UKD2 239 aaKnown RBP11.5□□□□□ -0.57
DDX55-206ENST00000539934 MMP17Q9ULZ9 603 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 PCDHB14Q9Y5E9 798 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 KNTC1P50748 2209 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 CABIN1Q9Y6J0 2220 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 CEP192Q8TEP8 1941 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 KCNE1BA0A087WTH5 132 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 CYSRT1A8MQ03 144 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 E7EQ34 232 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 IMPA2O14732 288 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 GZMHP20718 246 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 TNFSF8P32971 234 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 EFNA3P52797 238 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 PPP3R1P63098 170 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 HOXC5Q00444 222 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 TGM3Q08188 693 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 ZNF79Q15937 498 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 DECR1Q16698 335 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 PAGE3Q5JUK9 113 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 CD276Q5ZPR3 534 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 GLYATQ6IB77 296 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 ZNF529Q6P280 563 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 TRAT1Q6PIZ9 186 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 AHSA2Q719I0 299 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 KCTD9Q7L273 389 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 AMZ2Q86W34 360 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 FAM98AQ8NCA5 519 aaKnown RBP11.5□□□□□ -0.57
DDX55-206ENST00000539934 OR51A7Q8NH64 312 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 KLK6Q92876 244 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 MALSU1Q96EH3 234 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 LGR4Q9BXB1 951 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 RAB33BQ9H082 229 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 PCDHAC1Q9H158 963 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 MED28Q9H204 178 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 DNAJC4Q9NNZ3 241 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 PEF1Q9UBV8 284 aaKnown RBP11.5□□□□□ -0.57
DDX55-206ENST00000539934 PILRBQ9UKJ0 227 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 ATG4BQ9Y4P1 393 aa11.5□□□□□ -0.57
DDX55-206ENST00000539934 SLC1A7O00341 560 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 AIREO43918 545 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 CD59P13987 128 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 SERPINA2P20848 420 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 EXOC3L2Q2M3D2 409 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 FRG2Q64ET8 278 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 KANSL1Q7Z3B3 1105 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 OR8U1Q8NH10 309 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 OR4C6Q8NH72 309 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 NANOS1Q8WY41 292 aaKnown RBP11.49□□□□□ -0.57
DDX55-206ENST00000539934 NINJ1Q92982 152 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 FRG2BQ96QU4 278 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 DIRC2Q96SL1 478 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 PHB2Q99623 299 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 GABRG3Q99928 467 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 DPY30Q9C005 99 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 SLC25A32Q9H2D1 315 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 GALNT9Q9HCQ5 603 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 ISYNA1Q9NPH2 558 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 MBNL1Q9NR56 388 aaKnown RBP11.49□□□□□ -0.57
DDX55-206ENST00000539934 OAZ3Q9UMX2 235 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 ZFP30Q9Y2G7 519 aa11.49□□□□□ -0.57
DDX55-206ENST00000539934 PCYT1BQ9Y5K3 369 aaPredicted RBP11.49□□□□□ -0.57
DDX55-206ENST00000539934 ASPDHA6ND91 283 aa11.48□□□□□ -0.57
DDX55-206ENST00000539934 MAGEB17A8MXT2 336 aa11.48□□□□□ -0.57
DDX55-206ENST00000539934 FXYD1O00168 92 aa11.48□□□□□ -0.57
DDX55-206ENST00000539934 TLR4O00206 839 aa11.48□□□□□ -0.57
DDX55-206ENST00000539934 NME4O00746 187 aa11.48□□□□□ -0.57
DDX55-206ENST00000539934 POU3F2P20265 443 aaPredicted RBP11.48□□□□□ -0.57
DDX55-206ENST00000539934 SLC6A2P23975 617 aa11.48□□□□□ -0.57
DDX55-206ENST00000539934 ARR3P36575 388 aa11.48□□□□□ -0.57
DDX55-206ENST00000539934 OR3A1P47881 315 aa11.48□□□□□ -0.57
DDX55-206ENST00000539934 RPS21P63220 83 aaKnown RBP11.48□□□□□ -0.57
DDX55-206ENST00000539934 TRIP6Q15654 476 aaKnown RBP11.48□□□□□ -0.57
DDX55-206ENST00000539934 PSG3Q16557 428 aa11.48□□□□□ -0.57
DDX55-206ENST00000539934 SLC23A3Q6PIS1 610 aa11.48□□□□□ -0.57
DDX55-206ENST00000539934 ZNF836Q6ZNA1 936 aa11.48□□□□□ -0.57
DDX55-206ENST00000539934 IFNEQ86WN2 208 aa11.48□□□□□ -0.57
DDX55-206ENST00000539934 ZNF480Q8WV37 535 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms