RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 OR52D1Q9H346 318 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 PIGMQ9H3S5 423 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 ZDHHC6Q9H6R6 413 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 STARD5Q9NSY2 213 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 TEX10Q9NXF1 929 aaPredicted RBP6.97□□□□□ -1.29
CCDC60-204ENST00000539847 SIDT1Q9NXL6 827 aaKnown RBP6.97□□□□□ -1.29
CCDC60-204ENST00000539847 RASL12Q9NYN1 266 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 CNIH4Q9P003 139 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 IL17BQ9UHF5 180 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 OPN4Q9UHM6 478 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 ZNF107Q9UII5 783 aaPredicted RBP6.97□□□□□ -1.29
CCDC60-204ENST00000539847 CES1P1Q9UKY3 287 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 ICAM5Q9UMF0 924 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 COPS3Q9UNS2 423 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 SH2B3Q9UQQ2 575 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 ENTPD2Q9Y5L3 495 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 NBASA2RRP1 2371 aa6.97□□□□□ -1.29
CCDC60-204ENST00000539847 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 A0A1W2PNU3 283 aaPredicted RBP6.96□□□□□ -1.3
CCDC60-204ENST00000539847 RFPL4AA6NLU0 287 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 ANXA2P2A6NMY6 339 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 IFITM5A6NNB3 132 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 RIIAD1A6NNX1 92 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 LMO7DNF2Z398 122 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 RFPL4AL1F8VTS6 287 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 H7C2Y5 167 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 NTN3O00634 580 aaPredicted RBP6.96□□□□□ -1.3
CCDC60-204ENST00000539847 TMPRSS11DO60235 418 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 MTX2O75431 263 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 POP7O75817 140 aaKnown RBP6.96□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF432O94892 652 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 OR2F2O95006 317 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 APOC1P02654 83 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 MT-ND4P03905 459 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 IFNA4P05014 189 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 HMGN2P05204 90 aaKnown RBP6.96□□□□□ -1.3
CCDC60-204ENST00000539847 CTSLP07711 333 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 ZGLP1P0C6A0 271 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 SLC25A4P12235 298 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 PRG2P13727 222 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 TBXA2RP21731 343 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 XPAP23025 273 aaPredicted RBP6.96□□□□□ -1.3
CCDC60-204ENST00000539847 ATP5A1P25705 553 aaKnown RBP6.96□□□□□ -1.3
CCDC60-204ENST00000539847 AHRP35869 848 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 RBM34P42696 430 aaKnown RBP6.96□□□□□ -1.3
CCDC60-204ENST00000539847 RAD52P43351 418 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 PTH2RP49190 550 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 NCBP2P52298 156 aaKnown RBP eCLIP6.96□□□□□ -1.3
CCDC60-204ENST00000539847 RGS8P57771 180 aaPredicted RBP6.96□□□□□ -1.3
CCDC60-204ENST00000539847 LGALS3BPQ08380 585 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 MADCAM1Q13477 382 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 OR2F1Q13607 317 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 CDK5R1Q15078 307 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 TESK1Q15569 626 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 ETFDHQ16134 617 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 TMEM177Q53S58 311 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 SLC35D3Q5M8T2 416 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 CLEC12AQ5QGZ9 265 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF660Q6AZW8 331 aaPredicted RBP6.96□□□□□ -1.3
CCDC60-204ENST00000539847 LPCAT3Q6P1A2 487 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 FAM199XQ6PEV8 388 aaPredicted RBP6.96□□□□□ -1.3
CCDC60-204ENST00000539847 ZCCHC12Q6PEW1 402 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 LRRN1Q6UXK5 716 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 APOOLQ6UXV4 268 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 KRT77Q7Z794 578 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 RANBP3LQ86VV4 465 aaPredicted RBP6.96□□□□□ -1.3
CCDC60-204ENST00000539847 NKAIN4Q8IVV8 208 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 MMP21Q8N119 569 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 RAB42Q8N4Z0 105 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 BMPERQ8N8U9 685 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 CHST14Q8NCH0 376 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF740Q8NDX6 193 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 C1orf162Q8NEQ5 155 aaPredicted RBP6.96□□□□□ -1.3
CCDC60-204ENST00000539847 BBS1Q8NFJ9 593 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 PXT1Q8NFP0 134 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 BEST4Q8NFU0 473 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 OR10H4Q8NGA5 316 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 OR5D16Q8NGK9 328 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 OR52I2Q8NH67 350 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF671Q8TAW3 534 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 SMPDL3BQ92485 455 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 MARC2Q969Z3 335 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 MIB2Q96AX9 1013 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 DACT3Q96B18 629 aaPredicted RBP6.96□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF775Q96BV0 537 aaPredicted RBP6.96□□□□□ -1.3
CCDC60-204ENST00000539847 GIMAP5Q96F15 307 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 BMFQ96LC9 184 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 OR7D2Q96RA2 312 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 UQCC2Q9BRT2 126 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 SLC17A9Q9BYT1 436 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 C1orf198Q9H425 327 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 SCPEP1Q9HB40 452 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 ADGRL4Q9HBW9 690 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 SLC6A20Q9NP91 592 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 SLC17A5Q9NRA2 495 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 POLE3Q9NRF9 147 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 TAS2R10Q9NYW0 307 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 UPB1Q9UBR1 384 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 CD84Q9UIB8 345 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 MKL2Q9ULH7 1088 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms