RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 JMJD6Q6NYC1 403 aaPredicted RBP20.1■□□□□ 0.81
HOMER3-204ENST00000539827 RPL22L1Q6P5R6 122 aaKnown RBP20.1■□□□□ 0.81
HOMER3-204ENST00000539827 CEACAM19Q7Z692 300 aa20.1■□□□□ 0.81
HOMER3-204ENST00000539827 SLC39A7Q92504 469 aa20.1■□□□□ 0.81
HOMER3-204ENST00000539827 PPP1R14BQ96C90 147 aa20.1■□□□□ 0.81
HOMER3-204ENST00000539827 B3GNT4Q9C0J1 378 aa20.1■□□□□ 0.81
HOMER3-204ENST00000539827 PPIL3Q9H2H8 161 aaKnown RBP20.1■□□□□ 0.81
HOMER3-204ENST00000539827 DEPPQ9NTK1 212 aa20.1■□□□□ 0.81
HOMER3-204ENST00000539827 TBCCD1Q9NVR7 557 aa20.1■□□□□ 0.81
HOMER3-204ENST00000539827 MRPL22Q9NWU5 206 aaKnown RBP20.1■□□□□ 0.81
HOMER3-204ENST00000539827 KCNG2Q9UJ96 466 aa20.1■□□□□ 0.81
HOMER3-204ENST00000539827 TRBV2A0A0J9YWF9 115 aa20.09■□□□□ 0.81
HOMER3-204ENST00000539827 ZNF593O00488 134 aaPredicted RBP20.09■□□□□ 0.81
HOMER3-204ENST00000539827 RAMP1O60894 148 aa20.09■□□□□ 0.81
HOMER3-204ENST00000539827 MEP1BQ16820 701 aa20.09■□□□□ 0.81
HOMER3-204ENST00000539827 NHLRC1Q6VVB1 395 aa20.09■□□□□ 0.81
HOMER3-204ENST00000539827 LRRC69Q6ZNQ3 347 aa20.09■□□□□ 0.81
HOMER3-204ENST00000539827 TMPPEQ6ZT21 453 aa20.09■□□□□ 0.81
HOMER3-204ENST00000539827 GPAT4Q86UL3 456 aa20.09■□□□□ 0.81
HOMER3-204ENST00000539827 UEVLDQ8IX04 471 aa20.09■□□□□ 0.81
HOMER3-204ENST00000539827 YIPF7Q8N8F6 280 aa20.09■□□□□ 0.81
HOMER3-204ENST00000539827 ADPRHL1Q8NDY3 354 aa20.09■□□□□ 0.81
HOMER3-204ENST00000539827 SMIM19Q96E16 107 aa20.09■□□□□ 0.81
HOMER3-204ENST00000539827 KCNK17Q96T54 332 aa20.09■□□□□ 0.81
HOMER3-204ENST00000539827 KCNN2Q9H2S1 579 aa20.09■□□□□ 0.81
HOMER3-204ENST00000539827 FANCFQ9NPI8 374 aa20.09■□□□□ 0.81
HOMER3-204ENST00000539827 IKZF2Q9UKS7 526 aa20.09■□□□□ 0.81
HOMER3-204ENST00000539827 NPIPB13A6NJU9 1138 aa20.08■□□□□ 0.81
HOMER3-204ENST00000539827 NPIPB4C9JG80 1138 aa20.08■□□□□ 0.81
HOMER3-204ENST00000539827 RGS5O15539 181 aa20.08■□□□□ 0.81
HOMER3-204ENST00000539827 GAAP10253 952 aa20.08■□□□□ 0.81
HOMER3-204ENST00000539827 ALOX5APP20292 161 aa20.08■□□□□ 0.81
HOMER3-204ENST00000539827 FKBP2P26885 142 aaKnown RBP20.08■□□□□ 0.81
HOMER3-204ENST00000539827 CRABP1P29762 137 aa20.08■□□□□ 0.81
HOMER3-204ENST00000539827 CD96P40200 585 aa20.08■□□□□ 0.81
HOMER3-204ENST00000539827 ACSM3Q53FZ2 586 aa20.08■□□□□ 0.81
HOMER3-204ENST00000539827 SPINK14Q6IE38 97 aa20.08■□□□□ 0.81
HOMER3-204ENST00000539827 YRDCQ86U90 279 aaKnown RBP20.08■□□□□ 0.81
HOMER3-204ENST00000539827 CEP19Q96LK0 163 aa20.08■□□□□ 0.81
HOMER3-204ENST00000539827 AMELYQ99218 206 aa20.08■□□□□ 0.81
HOMER3-204ENST00000539827 LRFN3Q9BTN0 628 aa20.08■□□□□ 0.81
HOMER3-204ENST00000539827 IGKV1D-43A0A0B4J1Z2 117 aa20.08■□□□□ 0.8
HOMER3-204ENST00000539827 PFDN1O60925 122 aa20.08■□□□□ 0.8
HOMER3-204ENST00000539827 MPZL1O95297 269 aa20.08■□□□□ 0.8
HOMER3-204ENST00000539827 RBMS1P29558 406 aaKnown RBP20.08■□□□□ 0.8
HOMER3-204ENST00000539827 SLC35A1P78382 337 aa20.08■□□□□ 0.8
HOMER3-204ENST00000539827 ABHD17BQ5VST6 288 aa20.08■□□□□ 0.8
HOMER3-204ENST00000539827 TMEM225Q6GV28 225 aa20.08■□□□□ 0.8
HOMER3-204ENST00000539827 FAM220AQ7Z4H9 259 aa20.08■□□□□ 0.8
HOMER3-204ENST00000539827 RNF166Q96A37 237 aaPredicted RBP20.08■□□□□ 0.8
HOMER3-204ENST00000539827 MIB2Q96AX9 1013 aa20.08■□□□□ 0.8
HOMER3-204ENST00000539827 PDCD1LG2Q9BQ51 273 aa20.08■□□□□ 0.8
HOMER3-204ENST00000539827 LRFN1Q9P244 771 aa20.08■□□□□ 0.8
HOMER3-204ENST00000539827 TRAPPC4Q9Y296 219 aa20.08■□□□□ 0.8
HOMER3-204ENST00000539827 EP300Q09472 2414 aaPredicted RBP20.07■□□□□ 0.8
HOMER3-204ENST00000539827 IQCMA0A1B0GVH7 501 aa20.07■□□□□ 0.8
HOMER3-204ENST00000539827 PINLYPA6NC86 204 aa20.07■□□□□ 0.8
HOMER3-204ENST00000539827 LRRC3CA6NJW4 275 aa20.07■□□□□ 0.8
HOMER3-204ENST00000539827 TAF4O00268 1085 aa20.07■□□□□ 0.8
HOMER3-204ENST00000539827 SPARCP09486 303 aa20.07■□□□□ 0.8
HOMER3-204ENST00000539827 RFPL3SP0C7P2 107 aa20.07■□□□□ 0.8
HOMER3-204ENST00000539827 TNFSF8P32971 234 aa20.07■□□□□ 0.8
HOMER3-204ENST00000539827 PPP5CP53041 499 aa20.07■□□□□ 0.8
HOMER3-204ENST00000539827 NANOS3P60323 173 aaKnown RBP20.07■□□□□ 0.8
HOMER3-204ENST00000539827 IFITM3Q01628 133 aa20.07■□□□□ 0.8
HOMER3-204ENST00000539827 ATP1A1-AS1Q5TC04 95 aa20.07■□□□□ 0.8
HOMER3-204ENST00000539827 FAM205BPQ63HN1 556 aa20.07■□□□□ 0.8
HOMER3-204ENST00000539827 Q6ZNX1 250 aa20.07■□□□□ 0.8
HOMER3-204ENST00000539827 TMPRSS12Q86WS5 348 aa20.07■□□□□ 0.8
HOMER3-204ENST00000539827 PARP16Q8N5Y8 322 aa20.07■□□□□ 0.8
HOMER3-204ENST00000539827 OTOSQ8NHW6 89 aa20.07■□□□□ 0.8
HOMER3-204ENST00000539827 MNTQ99583 582 aa20.07■□□□□ 0.8
HOMER3-204ENST00000539827 FAM117AQ9C073 453 aa20.07■□□□□ 0.8
HOMER3-204ENST00000539827 KRT8P05787 483 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 TACSTD2P09758 323 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 SRD5A2P31213 254 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 BLVRAP53004 296 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 CCDC58Q4VC31 144 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 CCDC190Q86UF4 302 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 MS4A15Q8N5U1 240 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 OXGR1Q96P68 337 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 SLCO1C1Q9NYB5 712 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 TEKT2Q9UIF3 430 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 TMEM14AQ9Y6G1 99 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 UPK3AO75631 287 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 PMS2P2O95744 297 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 ABHD16AO95870 558 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 CNR1P21554 472 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 CD40LGP29965 261 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 NBL1P41271 181 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 ADAM8P78325 824 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 LIPNQ5VXI9 398 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 TUBA3EQ6PEY2 450 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 KCTD20Q7Z5Y7 419 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 LAX1Q8IWV1 398 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 OR14L1PQ8NHC6 308 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 ADAMTS14Q8WXS8 1223 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 HSD17B8Q92506 261 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 PIGQQ9BRB3 760 aa20.06■□□□□ 0.8
HOMER3-204ENST00000539827 RNF32Q9H0A6 362 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms