RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 KLK1P06870 262 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 SP1P08047 785 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 NHLRC4P0CG21 123 aaPredicted RBP3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 GOLGA8HP0CJ92 632 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 PRSS56P0CW18 603 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 GATA1P15976 413 aaPredicted RBP3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 IFNA8P32881 189 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 UGT1A3P35503 534 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 CEACAM3P40198 252 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 TNFSF9P41273 254 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 NSG1P42857 185 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 SLC1A1P43005 524 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 KIR3DL2P43630 455 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 BDKRB1P46663 353 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 QARSP47897 775 aaKnown RBP3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 PKNOX1P55347 436 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 MLF1P58340 268 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 VSNL1P62760 191 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 TSPAN31Q12999 210 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 PTGR1Q14914 329 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 SF3B4Q15427 424 aaKnown RBP eCLIP3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 OR4D1Q15615 310 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 ZBTB6Q15916 424 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 ZNF74Q16587 644 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 CALCRLQ16602 461 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 C5orf64Q2M2E5 130 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 ZNF284Q2VY69 593 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 ZNF672Q499Z4 452 aaPredicted RBP3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 C2CD6Q53TS8 623 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 PIGGQ5H8A4 983 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 PAPPA-AS1Q5QFB9 102 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 FNBP1LQ5T0N5 605 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 PDSS1Q5T2R2 415 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 OR4C11Q6IEV9 310 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 PRSS57Q6UWY2 283 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 LRRC31Q6UY01 552 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 CERS6Q6ZMG9 384 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 ZNF621Q6ZSS3 439 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 FCRLAQ7L513 359 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 BOD1L2Q8IYS8 172 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 ZBED8Q8IZ13 594 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 MCOLN2Q8IZK6 566 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 IQCKQ8N0W5 287 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 SLC39A11Q8N1S5 342 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 ZNF786Q8N393 782 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 CLIP4Q8N3C7 705 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 TRAM1L1Q8N609 369 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 TMEM105Q8N8V8 129 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 PRR26Q8N8Z3 221 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 RELL2Q8NC24 303 aaPredicted RBP3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 OR2AP1Q8NGE2 309 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 OR5D18Q8NGL1 313 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 OR6N2Q8NGY6 317 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 SMAP2Q8WU79 429 aaPredicted RBP3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 PHLDA1Q8WV24 401 aaPredicted RBP3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 DNAJB3Q8WWF6 145 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 TM9SF4Q92544 642 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 MYDGFQ969H8 173 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 ISOC2Q96AB3 205 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 C4orf45Q96LM5 186 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 RANBP9Q96S59 729 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 CYP2S1Q96SQ9 504 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 SYT4Q9H2B2 425 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 PPA2Q9H2U2 334 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 EBF3Q9H4W6 596 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 IKZF5Q9H5V7 419 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 ATP13A3Q9H7F0 1226 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 UBE2ZQ9H832 354 aaPredicted RBP3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 SLC25A19Q9HC21 320 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 MRPL40Q9NQ50 206 aaKnown RBP3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 C8orf4Q9NR00 106 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 DUS2Q9NX74 493 aaKnown RBP3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 CD274Q9NZQ7 290 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 BFARQ9NZS9 450 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 GALPQ9UBC7 116 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 TUBGCP4Q9UGJ1 667 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 FAF1Q9UNN5 650 aaPredicted RBP3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 USP16Q9Y5T5 823 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 AUP1Q9Y679 476 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 APC2O95996 2303 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 PDS5AQ29RF7 1337 aaKnown RBP3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 ADGRA3Q8IWK6 1321 aa3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 PCDH11XQ9BZA7 1347 aa3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 IGHV4-28A0A0C4DH34 117 aa3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 LOC105371267A0A1B0GV96 52 aa3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 CLDN34H7C241 214 aa3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 TFECO14948 347 aaPredicted RBP3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 ZNHIT1O43257 154 aa3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 AQP9O43315 295 aa3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 B4GAT1O43505 415 aa3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 CYTH3O43739 400 aa3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 ATP5LO75964 103 aa3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 CIAO1O76071 339 aa3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 NDUFB8O95169 186 aa3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 NADKO95544 446 aaPredicted RBP3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 RAB3DO95716 219 aa3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 FGF19O95750 216 aa3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 LDOC1O95751 146 aaPredicted RBP3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 AP2A1O95782 977 aa3.27□□□□□ -1.89
AC055720.1-201ENST00000539552 ASS1P00966 412 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms