RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ZCCHC13Q8WW36 166 aaKnown RBP2□□□□□ -2.09
CCDC7-209ENST00000539197 RSPH1Q8WYR4 309 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 MED8Q96G25 268 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 HSFY1Q96LI6 401 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 ZNF607Q96SK3 696 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 SORT1Q99523 831 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 KCTD14Q9BQ13 255 aaPredicted RBP2□□□□□ -2.09
CCDC7-209ENST00000539197 ISYNA1Q9NPH2 558 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 GPATCH2LQ9NWQ4 482 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 MRPS7Q9Y2R9 242 aaKnown RBP2□□□□□ -2.09
CCDC7-209ENST00000539197 MMACHCQ9Y4U1 282 aa2□□□□□ -2.09
CCDC7-209ENST00000539197 CENPJQ9HC77 1338 aaPredicted RBP1.99□□□□□ -2.09
CCDC7-209ENST00000539197 IGLV3-22A0A075B6J6 115 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 IGHV3-74A0A0B4J1X5 117 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 A0A1B0GVI7 797 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 A0A1B0GVX0 72 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 H0YHG0 523 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 RAD51BO15315 384 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 MPZL1O95297 269 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 FOLR1P15328 257 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 ACAA2P42765 397 aaKnown RBP1.99□□□□□ -2.09
CCDC7-209ENST00000539197 NPBWR2P48146 333 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 ARG2P78540 354 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 SYCNQ0VAF6 134 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 ARHGAP19Q14CB8 494 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 RABL6Q3YEC7 729 aaPredicted RBP1.99□□□□□ -2.09
CCDC7-209ENST00000539197 KCTD21Q4G0X4 260 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 VAX1Q5SQQ9 334 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 OR4F3Q6IEY1 312 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 BHLHA15Q7RTS1 189 aaPredicted RBP1.99□□□□□ -2.09
CCDC7-209ENST00000539197 C15orf56Q8N910 161 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 ZNF557Q8N988 423 aaPredicted RBP1.99□□□□□ -2.09
CCDC7-209ENST00000539197 OR2G2Q8NGZ5 317 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 MAGEE2Q8TD90 523 aaPredicted RBP1.99□□□□□ -2.09
CCDC7-209ENST00000539197 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.99□□□□□ -2.09
CCDC7-209ENST00000539197 OR8B4Q96RC9 309 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 COPS8Q99627 209 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 SH3GL3Q99963 347 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 RAB33BQ9H082 229 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 UGT1A7Q9HAW7 530 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 UGT1A10Q9HAW8 530 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 UGT1A8Q9HAW9 530 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 POLE4Q9NR33 117 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 SMOXQ9NWM0 555 aa1.99□□□□□ -2.09
CCDC7-209ENST00000539197 DDX49Q9Y6V7 483 aaKnown RBP1.99□□□□□ -2.09
CCDC7-209ENST00000539197 CEMIPQ8WUJ3 1361 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 IGLV3-12A0A075B6K2 115 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 IGHV5-10-1A0A0J9YXX1 117 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 TMEM223A0PJW6 202 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 RPL36A-HNRNPH2H7BZ11 118 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 K7EPI3 171 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 PEX11AO75192 247 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 RHOBTB1O94844 696 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 CLDN9O95484 217 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 IL4P05112 153 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 FGF1P05230 155 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 HEXBP07686 556 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 LINC00869P0C866 280 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 HSPA5P11021 654 aaKnown RBP1.98□□□□□ -2.09
CCDC7-209ENST00000539197 ATP5C1P36542 298 aaKnown RBP1.98□□□□□ -2.09
CCDC7-209ENST00000539197 FDFT1P37268 417 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 OPRD1P41143 372 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 GRIA1P42261 906 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 DUSP3P51452 185 aaPredicted RBP1.98□□□□□ -2.09
CCDC7-209ENST00000539197 ESRRGP62508 458 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 CDK16Q00536 496 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 FGL1Q08830 312 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 PIGHQ14442 188 aaPredicted RBP1.98□□□□□ -2.09
CCDC7-209ENST00000539197 FAM78AQ5JUQ0 283 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 ZNF684Q5T5D7 378 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 Q6ZPB1 254 aaPredicted RBP1.98□□□□□ -2.09
CCDC7-209ENST00000539197 NCCRP1Q6ZVX7 275 aaPredicted RBP1.98□□□□□ -2.09
CCDC7-209ENST00000539197 OAFQ86UD1 273 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 PRSS58Q8IYP2 241 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 LGI3Q8N145 548 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 OR4S2Q8NH73 311 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 EMG1Q92979 244 aaKnown RBP1.98□□□□□ -2.09
CCDC7-209ENST00000539197 STMN2Q93045 179 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 L3HYPDHQ96EM0 354 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 WFIKKN1Q96NZ8 548 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 CHAC1Q9BUX1 264 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 PARP12Q9H0J9 701 aaKnown RBP1.98□□□□□ -2.09
CCDC7-209ENST00000539197 AZI2Q9H6S1 392 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 LIN28AQ9H9Z2 209 aaKnown RBP1.98□□□□□ -2.09
CCDC7-209ENST00000539197 SH3BGRL2Q9UJC5 107 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 KIAA1257Q9ULG3 409 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 AP1M2Q9Y6Q5 423 aa1.98□□□□□ -2.09
CCDC7-209ENST00000539197 IGKV1D-13A0A0B4J2D9 117 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 SGK1O00141 431 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 DYNC1I1O14576 645 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 ANGPT2O15123 496 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 SMPD2O60906 423 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 HLA-DPB1P04440 258 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 OR56A5P0C7T3 313 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 IGKV1-13P0DP09 117 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 CSNK1A1P48729 337 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 ATP1B3P54709 279 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 PITPNAQ00169 270 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 ELP6Q0PNE2 266 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 MRPL28Q13084 256 aaKnown RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms