RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 OSBPL11Q9BXB4 747 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 DGCR6LQ9BY27 220 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 FRMD8P1Q9BZ68 369 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 C8orf33Q9H7E9 229 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 FOLH1BQ9HBA9 442 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 SPACA1Q9HBV2 294 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 NEK6Q9HC98 313 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 PLSCR3Q9NRY6 295 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 RIMS3Q9UJD0 308 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 KIAA1257Q9ULG3 409 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 SLC9A8Q9Y2E8 581 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 PRG3Q9Y2Y8 225 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 SIGLEC9Q9Y336 463 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 PUS1Q9Y606 427 aaKnown RBP eCLIP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 CPQQ9Y646 472 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 URB2Q14146 1524 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ADGBQ8N7X0 1667 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 TNXBP22105 4242 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 LOC100131303A0A0U1RQF7 123 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 A0A1B0GVI7 797 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 A0A1B0GVL5 298 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 OR6C74A6NCV1 312 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 NCF1BA6NI72 391 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 OR6C65A6NJZ3 312 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 NCF1CA8MVU1 366 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 SIRPB1O00241 398 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 MPHOSPH10O00566 681 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 PLPP3O14495 311 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 MED7O43513 233 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 C6orf47O95873 294 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 CD1EP15812 388 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ATF6P18850 670 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 CNR1P21554 472 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 BGNP21810 368 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 WARSP23381 471 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 GABRR1P24046 479 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ELK4P28324 431 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 BMI1P35226 326 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ARHGDIAP52565 204 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ACTBP60709 375 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 SNRPD1P62314 119 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ACTA2P62736 377 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ACTG1P63261 375 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ACTG2P63267 376 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ACTC1P68032 377 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ACTA1P68133 377 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 IHHQ14623 411 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF829Q3KNS6 432 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 SLC25A52Q3SY17 297 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ZFP69Q49AA0 526 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 C9orf129Q5T035 196 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 CXCL17Q6UXB2 119 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 TMIGD1Q6UXZ0 262 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 MCOLN2Q8IZK6 566 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 OFCC1Q8IZS5 231 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ABHD12Q8N2K0 398 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 GTPBP8Q8N3Z3 284 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 MREGQ8N565 214 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 JAGN1Q8N5M9 183 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ZFP41Q8N8Y5 198 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 MNS1Q8NEH6 495 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 OR51G2Q8NGK0 314 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 OR2A12Q8NGT7 310 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 OR2A1Q8NGT9 310 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 CD300LFQ8TDQ1 290 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ST8SIA1Q92185 356 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 SGK3Q96BR1 496 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ART5Q96L15 291 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 OR5B2Q96R09 309 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 NPAS2Q99743 824 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 APOL2Q9BQE5 337 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 SYT11Q9BT88 431 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 TMEM43Q9BTV4 400 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 LRRC61Q9BV99 259 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 TMEM59Q9BXS4 323 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 UGT2B28Q9BY64 529 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 NARFLQ9H6Q4 476 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 DHX33Q9H6R0 707 aaKnown RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 RNF167Q9H6Y7 350 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ZDHHC4Q9NPG8 344 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 PDP1Q9P0J1 537 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 KLHL21Q9UJP4 597 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 CDH9Q9ULB4 789 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 POFUT2Q9Y2G5 429 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF256Q9Y2P7 627 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-204ENST00000539097 COMMD3-BMI1R4GMX3 469 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF462Q96JM2 2506 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 REREQ9P2R6 1566 aa0.77□□□□□ -2.29
HIF1A-204ENST00000539097 QRICH2Q9H0J4 1663 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CHD2O14647 1828 aaKnown RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 NEBP20929 6669 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 EPOPA6NHQ4 379 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 FHAD1B1AJZ9 1412 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 B4GALT5O43286 388 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 LRRTM2O43300 516 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PPIHO43447 177 aaKnown RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 TRAF3IP2O43734 574 aaPredicted RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 IDH3BO43837 385 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 FAM189A1O60320 539 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SCRG1O75711 98 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms