RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 DAP3P51398 398 aaKnown RBP11.92□□□□□ -0.5
CD9-208ENST00000538834 SMIM11AP58511 58 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 RPL27P61353 136 aaKnown RBP11.92□□□□□ -0.5
CD9-208ENST00000538834 ADAM8P78325 824 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 IL1RL1Q01638 556 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 ZNF770Q6IQ21 691 aaPredicted RBP11.92□□□□□ -0.5
CD9-208ENST00000538834 C1orf94Q6P1W5 598 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 PRSS57Q6UWY2 283 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 CYP2R1Q6VVX0 501 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 HDDC2Q7Z4H3 204 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 OAFQ86UD1 273 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 DHFR2Q86XF0 187 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 ZDHHC21Q8IVQ6 265 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 NOXO1Q8NFA2 376 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 OR4C15Q8NGM1 316 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 OR13C2Q8NGS9 318 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 OR6N1Q8NGY5 312 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 FGFBP3Q8TAT2 258 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 CLPTM1LQ96KA5 538 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 SLC38A2Q96QD8 506 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 TSPAN32Q96QS1 320 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 ZNF347Q96SE7 839 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 TRAF4Q9BUZ4 470 aaPredicted RBP11.92□□□□□ -0.5
CD9-208ENST00000538834 ALG12Q9BV10 488 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 KATNB1Q9BVA0 655 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 TMUB1Q9BVT8 246 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 C1QTNF6Q9BXI9 259 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 ULBP2Q9BZM5 246 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 SEC61A2Q9H9S3 476 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 DLL4Q9NR61 685 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 TMEM38BQ9NVV0 291 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 CISD1Q9NZ45 108 aaKnown RBP11.92□□□□□ -0.5
CD9-208ENST00000538834 STX18Q9P2W9 335 aaKnown RBP11.92□□□□□ -0.5
CD9-208ENST00000538834 ITGB1BP2Q9UKP3 347 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 MTORP42345 2549 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 MCIDASD6RGH6 385 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 M0R1B8 84 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 SERPINI2O75830 405 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 KRT36O76013 467 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 PDE5AO76074 875 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 GADD45GO95257 159 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 TXNDC12O95881 172 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 CD14P08571 375 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 QDPRP09417 244 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 CECR9P0C854 216 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 ARR3P36575 388 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 GPR4P46093 362 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 CTXN1P60606 82 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 NAAAQ02083 359 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 FAM205BPQ63HN1 556 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 THSD4Q6ZMP0 1018 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 ZNF813Q6ZN06 617 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 TGIF2LYQ8IUE0 185 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 SKA3Q8IX90 412 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 CDK20Q8IZL9 346 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 ARIH2OSQ8N7S6 290 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 OR51A7Q8NH64 312 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 SMAP2Q8WU79 429 aaPredicted RBP11.91□□□□□ -0.5
CD9-208ENST00000538834 NABP1Q96AH0 204 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 FAM46AQ96IP4 442 aaKnown RBP11.91□□□□□ -0.5
CD9-208ENST00000538834 BTBD10Q9BSF8 475 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 TRIM15Q9C019 465 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 LYVE1Q9Y5Y7 322 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 V9GYQ6 96 aa11.91□□□□□ -0.5
CD9-208ENST00000538834 AQP12BA6NM10 295 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 AHCYL1O43865 530 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 SEC14L2O76054 403 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 CELA3BP08861 270 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 MMP7P09237 267 aaPredicted RBP11.9□□□□□ -0.5
CD9-208ENST00000538834 SAGP10523 405 aaPredicted RBP11.9□□□□□ -0.5
CD9-208ENST00000538834 ZNF35P13682 527 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 APEHP13798 732 aaKnown RBP11.9□□□□□ -0.5
CD9-208ENST00000538834 CALCRP30988 508 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 RRM2P31350 389 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 TTKP33981 857 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 UBE2NP61088 152 aaKnown RBP11.9□□□□□ -0.5
CD9-208ENST00000538834 TUBA1BP68363 451 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 TUBA4AP68366 448 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 NKX6-1P78426 367 aaPredicted RBP11.9□□□□□ -0.5
CD9-208ENST00000538834 MRPS34P82930 218 aaKnown RBP11.9□□□□□ -0.5
CD9-208ENST00000538834 HGFACQ04756 655 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 MST1LQ2TV78 715 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 ALKBH2Q6NS38 261 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 ZNF544Q6NX49 715 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 KLHL24Q6TFL4 600 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 DNM1P46Q6ZS02 220 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 TUBA1AQ71U36 451 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 MDP1Q86V88 176 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 ZNF584Q8IVC4 421 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 AQP12AQ8IXF9 295 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 ADGRG5Q8IZF4 528 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 SLC22A24Q8N4F4 322 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 FNDC8Q8TC99 324 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 CCL19Q99731 98 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 DHRS9Q9BPW9 319 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 THTPAQ9BU02 230 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 POFUT2Q9Y2G5 429 aa11.9□□□□□ -0.5
CD9-208ENST00000538834 GSC2O15499 205 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 HLA-HP01893 362 aa11.89□□□□□ -0.51
CD9-208ENST00000538834 OR8G3PP0DMU2 310 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms