RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 EPYCQ99645 322 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 ROPN1BQ9BZX4 212 aaPredicted RBP11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 RMND5AQ9H871 391 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 RNF121Q9H920 327 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 UNKLQ9H9P5 680 aaKnown RBP11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 ROPN1Q9HAT0 212 aaPredicted RBP11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 BCL2L10Q9HD36 194 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 A4GALTQ9NPC4 353 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 SLCO1C1Q9NYB5 712 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 MRPL39Q9NYK5 338 aaKnown RBP11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 UBAP1Q9NZ09 502 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 SELENONQ9NZV5 590 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 VWFP04275 2813 aa11.91□□□□□ -0.5
SMARCA4-206ENST00000538456 PLPP3O14495 311 aa11.9□□□□□ -0.5
SMARCA4-206ENST00000538456 OR8G3PP0DMU2 310 aa11.9□□□□□ -0.5
SMARCA4-206ENST00000538456 MAKP20794 623 aa11.9□□□□□ -0.5
SMARCA4-206ENST00000538456 DRD4P21917 467 aa11.9□□□□□ -0.5
SMARCA4-206ENST00000538456 PRKAR1BP31321 381 aa11.9□□□□□ -0.5
SMARCA4-206ENST00000538456 RGNQ15493 299 aa11.9□□□□□ -0.5
SMARCA4-206ENST00000538456 PDCD4Q53EL6 469 aaKnown RBP11.9□□□□□ -0.5
SMARCA4-206ENST00000538456 PXKQ7Z7A4 578 aa11.9□□□□□ -0.5
SMARCA4-206ENST00000538456 RETREG3Q86VR2 466 aa11.9□□□□□ -0.5
SMARCA4-206ENST00000538456 NFKBIDQ8NI38 313 aa11.9□□□□□ -0.5
SMARCA4-206ENST00000538456 ZNF519Q8TB69 540 aa11.9□□□□□ -0.5
SMARCA4-206ENST00000538456 CCL17Q92583 94 aa11.9□□□□□ -0.5
SMARCA4-206ENST00000538456 SLC47A1Q96FL8 570 aa11.9□□□□□ -0.5
SMARCA4-206ENST00000538456 NKIRAS2Q9NYR9 191 aa11.9□□□□□ -0.5
SMARCA4-206ENST00000538456 NOTCH1P46531 2555 aa11.9□□□□□ -0.5
SMARCA4-206ENST00000538456 TANC2Q9HCD6 1990 aa11.9□□□□□ -0.5
SMARCA4-206ENST00000538456 PRKDCP78527 4128 aaKnown RBP11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 TPST1O60507 370 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 SASH3O75995 380 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 FARS2O95363 451 aaKnown RBP11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 MT-ND5P03915 603 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 ADORA3P0DMS8 318 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 KITP10721 976 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 IDO1P14902 403 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 PRTN3P24158 256 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 ZFP36P26651 326 aaKnown RBP11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 RGS8P57771 180 aaPredicted RBP11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 BST1Q10588 318 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 HNRNPA0Q13151 305 aaKnown RBP11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 TBC1D28Q2M2D7 210 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 ARMCX4Q5H9R4 360 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 FAM91A1Q658Y4 838 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 TMEM53Q6P2H8 277 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 TREML1Q86YW5 311 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 OR4K5Q8NGD3 323 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 OR9I1Q8NGQ6 314 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 OR6S1Q8NH40 331 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 TAF15Q92804 592 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 TMEM54Q969K7 222 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 LRRC58Q96CX6 371 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 PAIP2Q9BPZ3 127 aaKnown RBP11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 TMEM38BQ9NVV0 291 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 GLTPQ9NZD2 209 aa11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 TESQ9UGI8 421 aaKnown RBP11.89□□□□□ -0.51
SMARCA4-206ENST00000538456 CMYA5Q8N3K9 4069 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 A0A0B4J2E0 115 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 A0A1B0GX12 115 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 CLIC1O00299 241 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 TM9SF1O15321 606 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 SPRY3O43610 288 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 OR6A2O95222 327 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 ETS2P15036 469 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 ZNF81P51508 661 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 CDH12P55289 794 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 UCP2P55851 309 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 MELKQ14680 651 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 OR1Q1Q15612 314 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 KRT71Q3SY84 523 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 CEP85LQ5SZL2 805 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 SPATA46Q5T0L3 261 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 SLC35D2Q76EJ3 337 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 BCL6BQ8N143 479 aaPredicted RBP11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 OR1J1Q8NGS3 322 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 OR5J2Q8NH18 312 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 ST7LQ8TDW4 575 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 ZNF566Q969W8 418 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 ZBTB9Q96C00 473 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 ELMOD3Q96FG2 381 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 C1orf147Q96MC9 270 aaPredicted RBP11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 BCL2L14Q9BZR8 327 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 C1orf198Q9H425 327 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 TMEM27Q9HBJ8 222 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 TCF7L2Q9NQB0 619 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 ZNF69Q9UC07 566 aa11.88□□□□□ -0.51
SMARCA4-206ENST00000538456 TRPC5OSA6NMA1 111 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 HDAC3O15379 428 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 ENTPD5O75356 428 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 SNAP29O95721 258 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 IGHV1-46P01743 117 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 CCNOP22674 350 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 ATP4BP51164 291 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 POLR2JP52435 117 aaKnown RBP11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 BAMBIQ13145 260 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 FADDQ13158 208 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 MPP2Q14168 576 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 SLC36A2Q495M3 483 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 LRFN4Q6PJG9 635 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms