RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ZFP3Q96NJ6 502 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 SPSB2Q99619 263 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 PRDM6Q9NQX0 595 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 MRPS7Q9Y2R9 242 aaKnown RBP12.62□□□□□ -0.39
LIMK1-208ENST00000538333 HRH3Q9Y5N1 445 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 TRBV5-7A0A0A0MS05 114 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 TRBV11-1A0A0K0K1C0 115 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 TMEM212A6NML5 194 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 ZNF593O00488 134 aaPredicted RBP12.62□□□□□ -0.39
LIMK1-208ENST00000538333 SLC16A7O60669 478 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 IL11P20809 199 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 EMP2P54851 167 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 ETFDHQ16134 617 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 NTRK2Q16620 822 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 STPG1Q5TH74 334 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 OTPQ5XKR4 325 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 LCN10Q6JVE6 187 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 TCTE3Q8IZS6 198 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 OR10AC1Q8NH08 325 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 OR8K3Q8NH51 312 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 SMIM4Q8WVI0 70 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 ARL5BQ96KC2 179 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 C4orf45Q96LM5 186 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 OR8B4Q96RC9 309 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 LIN7BQ9HAP6 207 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 ITGB1BP2Q9UKP3 347 aa12.62□□□□□ -0.39
LIMK1-208ENST00000538333 MS4A18H0YCH9 400 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 ETV2O00321 342 aaPredicted RBP12.61□□□□□ -0.39
LIMK1-208ENST00000538333 ZNF432O94892 652 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 OR6A2O95222 327 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 TDGF1P13385 188 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 HLA-DOBP13765 273 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 NAGAP17050 411 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 KIR3DL2P43630 455 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 SOX2P48431 317 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 CENPAP49450 140 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 BLVRAP53004 296 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 MS4A18Q3C1V0 323 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 TIGD3Q6B0B8 471 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 TMEM205Q6UW68 189 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 ARSKQ6UWY0 536 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 PRSS45Q7RTY3 260 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 CPEB2Q7Z5Q1 589 aaKnown RBP12.61□□□□□ -0.39
LIMK1-208ENST00000538333 SIAH3Q8IW03 269 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 TOMM5Q8N4H5 51 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 OR51A4Q8NGJ6 313 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 ATOH1Q92858 354 aaPredicted RBP12.61□□□□□ -0.39
LIMK1-208ENST00000538333 RELTQ969Z4 430 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 FOXN4Q96NZ1 517 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 DCBLD2Q96PD2 775 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 APMAPQ9HDC9 416 aa12.61□□□□□ -0.39
LIMK1-208ENST00000538333 RALGAPA1Q6GYQ0 2036 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 HLA-DQA2P01906 255 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 RAF1P04049 648 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 GSTT2P0CG29 244 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 GSTT2BP0CG30 244 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 APOBEC1P41238 236 aaKnown RBP12.6□□□□□ -0.39
LIMK1-208ENST00000538333 CLDN12P56749 244 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 RRAS2P62070 204 aaPredicted RBP12.6□□□□□ -0.39
LIMK1-208ENST00000538333 RASGEF1BQ0VAM2 473 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 ZP4Q12836 540 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 MELKQ14680 651 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 SLC17A1Q14916 467 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 MEP1BQ16820 701 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 WDR38Q5JTN6 314 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 BICRALQ6AI39 1079 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 LYPD8Q6UX82 237 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 LRRN1Q6UXK5 716 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 SLC35D2Q76EJ3 337 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 FCRLAQ7L513 359 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 NOXA1Q86UR1 476 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 IZUMO1Q8IYV9 350 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 ASB17Q8WXJ9 295 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 TTC9Q92623 222 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 C8orf44Q96CB5 159 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 MRI1Q9BV20 369 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 COMMD4Q9H0A8 199 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 SLC26A1Q9H2B4 701 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 ELOVL3Q9HB03 270 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 TCF7L1Q9HCS4 588 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 MED11Q9P086 117 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 RABL2AQ9UBK7 228 aaPredicted RBP12.6□□□□□ -0.39
LIMK1-208ENST00000538333 OR5V1Q9UGF6 321 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 RABL2BQ9UNT1 228 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 TRAV8-7A0A075B6U6 113 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 C19orf67A6NJJ6 358 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 CALCBP10092 127 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 RCVRNP35243 200 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 RAB25P57735 213 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 ROM1Q03395 351 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 PUDPQ08623 228 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 KLF9Q13886 244 aaPredicted RBP12.6□□□□□ -0.39
LIMK1-208ENST00000538333 RNASE12Q5GAN4 147 aaKnown RBP12.6□□□□□ -0.39
LIMK1-208ENST00000538333 TEX30Q5JUR7 227 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 WDR5BQ86VZ2 330 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 PPP1R3BQ86XI6 285 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 ZNF679Q8IYX0 411 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 KDM8Q8N371 416 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 ZNF676Q8N7Q3 588 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms