RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 SEMA3DO95025 777 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PSMG1O95456 288 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 IGKV1D-16P01601 117 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 IGHEP01854 428 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SLC35E2P0CK97 266 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 STAG3L3P0CL85 134 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CCL3P10147 92 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 LAMP1P11279 417 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 BCKDHAP12694 445 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 IRF2P14316 349 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CPMP14384 443 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SDC1P18827 310 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TAC1P20366 129 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GNLYP22749 145 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CPN2P22792 545 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 JAK1P23458 1154 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PTPN6P29350 595 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 BMI1P35226 326 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PIGAP37287 484 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CAPGP40121 348 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PTGDSP41222 190 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SOX3P41225 446 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MAP3K8P41279 467 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SSR2P43308 183 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 OR3A3P47888 321 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 HLCSP50747 726 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SUCLG1P53597 346 aaKnown RBP2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MAPK12P53778 367 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GAS1P54826 345 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PKNOX1P55347 436 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MTCP1P56278 107 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 KCNK10P57789 538 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ABCE1P61221 599 aaKnown RBP2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ERVK-8P63133 956 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PHEXP78562 749 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CBX1P83916 185 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 HSF1Q00613 529 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MYBPC1Q00872 1141 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ZNF33BQ06732 778 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 IFFO1Q0D2I5 559 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 C2orf80Q0P641 193 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 FUT7Q11130 342 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ASPHQ12797 758 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 KLRB1Q12918 225 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MYBPHQ13203 477 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PTGR1Q14914 329 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 OR1C1Q15619 314 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CHI3L2Q15782 390 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ZNF791Q3KP31 576 aaPredicted RBP2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CCDC153Q494R4 210 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ESCO2Q56NI9 601 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PIGGQ5H8A4 983 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ZNF311Q5JNZ3 666 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PAGE2BQ5JRK9 111 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 AGAP7PQ5VUJ5 663 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 AGAP6Q5VW22 663 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 NCR3LG1Q68D85 454 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 WBP2NLQ6ICG8 309 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CGB2Q6NT52 195 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SLC48A1Q6P1K1 146 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TRIM40Q6P9F5 258 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CYB5D1Q6P9G0 228 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TEX38Q6PEX7 206 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 KCTD18Q6PI47 426 aaPredicted RBP2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PLXDC2Q6UX71 529 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 NPSR1Q6W5P4 371 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 B3GNT6Q6ZMB0 384 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 NCCRP1Q6ZVX7 275 aaPredicted RBP2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 OLIG3Q7RTU3 272 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 C16orf62Q7Z3J2 963 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GALNT10Q86SR1 603 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PATL1Q86TB9 770 aaKnown RBP2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RPS19BP1Q86WX3 136 aaKnown RBP2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RAB43Q86YS6 212 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TGIF2LXQ8IUE1 241 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 NUDCD3Q8IVD9 361 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ZNF595Q8IYB9 648 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GCNT2Q8N0V5 402 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 C10orf111Q8N326 155 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GPR137CQ8N3F9 429 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RPRMLQ8N4K4 120 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CPSF7Q8N684 471 aaKnown RBP2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GCSAMQ8N6F7 178 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TMEM217Q8N7C4 229 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 BCORP1Q8N888 145 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GBP7Q8N8V2 638 aaPredicted RBP2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 BBS1Q8NFJ9 593 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 B3GNT7Q8NFL0 401 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TTLQ8NG68 377 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 OR7G2Q8NG99 324 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 OR7A2PQ8NGA2 310 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 OR10G3Q8NGC4 313 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 OR9A2Q8NGT5 310 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 C16orf52Q8NHV5 167 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 FAM81AQ8TBF8 368 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GRHL3Q8TE85 626 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CHPT1Q8WUD6 406 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TWIST2Q8WVJ9 160 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GGHQ92820 318 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms