RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 SEPT5Q99719 369 aaPredicted RBP7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 SLC25A31Q9H0C2 315 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 HINT3Q9NQE9 182 aaKnown RBP7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 NCDNQ9UBB6 729 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 KCNG2Q9UJ96 466 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 STARD10Q9Y365 291 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 MMP24Q9Y5R2 645 aa7.8□□□□□ -1.16
SRGAP1-202ENST00000537556 TRBV6-7A0A0A0MS04 114 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 TCRBV21S2A2A0A5A6 115 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 HLA-AP01891 365 aaKnown RBP7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 OPN1LWP04000 364 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 CD82P27701 267 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 LSM11P83369 360 aaKnown RBP eCLIP7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 CYCSP99999 105 aaKnown RBP7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 MS4A13Q5J8X5 152 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 ZNF774Q6NX45 483 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 RNF175Q8N4F7 328 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 ZNF433Q8N7K0 673 aaPredicted RBP7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 SEMA6DQ8NFY4 1073 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 OR52N4Q8NGI2 321 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 OR1N1Q8NGS0 311 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 OR13C5Q8NGS8 318 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 CXCL16Q9H2A7 254 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 BRF2Q9HAW0 419 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 MYOTQ9UBF9 498 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 SLC23A2Q9UGH3 650 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 SCML2Q9UQR0 700 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 CSAG2Q9Y5P2 127 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 V9GY05 133 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 EVPLQ92817 2033 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 MYO10Q9HD67 2058 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 LOC100509620A0A075B734 347 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 SLC22A31A6NKX4 558 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 FAM171A2A8MVW0 826 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 CCSO14618 274 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 HBP1O60381 514 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 RAMP2O60895 175 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 GJB3O75712 270 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 OR5AC1P0C628 307 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 AOAHP28039 575 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 RAP1BP61224 184 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 INSM1Q01101 510 aaPredicted RBP7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 SERINC3Q13530 473 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 GUK1Q16774 197 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 ZNF385BQ569K4 471 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 PRRT3Q5FWE3 981 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 FRRS1Q6ZNA5 592 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 SLC35D2Q76EJ3 337 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 GJD3Q8N144 294 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 SNIP1Q8TAD8 396 aaKnown RBP7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 RGP1Q92546 391 aaPredicted RBP7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 EXTL1Q92935 676 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 SMIM19Q96E16 107 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 SLC41A3Q96GZ6 507 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 MRGPRX3Q96LB0 322 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 WFIKKN1Q96NZ8 548 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 PHB2Q99623 299 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 URM1Q9BTM9 101 aaKnown RBP7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 EIF5A2Q9GZV4 153 aaKnown RBP7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 BPIFA1Q9NP55 256 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 OR2S2Q9NQN1 319 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 CUTCQ9NTM9 273 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 PPIL1Q9Y3C6 166 aa7.79□□□□□ -1.16
SRGAP1-202ENST00000537556 A0A087WUU8 490 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 UNC119BA6NIH7 251 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 GAPDHSO14556 408 aaPredicted RBP7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 TAAR5O14804 337 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 EFSO43281 561 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 TSPAN2O60636 221 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 LILRB3O75022 631 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 LRP3O75074 770 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 ASGR1P07306 291 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 RAB6AP20340 208 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 TACR3P29371 465 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 TIA1P31483 386 aaKnown RBP eCLIP7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 AKT2P31751 481 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 APLNRP35414 380 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 ACTBP60709 375 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 ACTG1P63261 375 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 ACTC1P68032 377 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 ACTA1P68133 377 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 HERPUD1Q15011 391 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 XKR4Q5GH76 650 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 NCR3LG1Q68D85 454 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 SLC25A24Q6NUK1 477 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 NIPAL3Q6P499 406 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 RPTNQ6XPR3 784 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 MTSS1LQ765P7 747 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 SSX7Q7RTT5 188 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 TIPARPQ7Z3E1 657 aaKnown RBP7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 MFSD9Q8NBP5 474 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 ZCCHC10Q8TBK6 192 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 GPR148Q8TDV2 347 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 SHDQ96IW2 340 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 SGIP1Q9BQI5 828 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 SLC35B3Q9H1N7 401 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 GPR173Q9NS66 373 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 OR5V1Q9UGF6 321 aa7.78□□□□□ -1.16
SRGAP1-202ENST00000537556 AKT3Q9Y243 479 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms