RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 KIR3DL2P43630 455 aa12.96□□□□□ -0.33
USP44-203ENST00000537435 OR1D4P47884 311 aa12.96□□□□□ -0.33
USP44-203ENST00000537435 LBX1P52954 281 aa12.96□□□□□ -0.33
USP44-203ENST00000537435 PSMA6P60900 246 aaKnown RBP12.96□□□□□ -0.33
USP44-203ENST00000537435 TOMM34Q15785 309 aaPredicted RBP12.96□□□□□ -0.33
USP44-203ENST00000537435 GRK1Q15835 563 aa12.96□□□□□ -0.33
USP44-203ENST00000537435 WDR38Q5JTN6 314 aa12.96□□□□□ -0.33
USP44-203ENST00000537435 CLLU1Q5K131 121 aa12.96□□□□□ -0.33
USP44-203ENST00000537435 ZNF626Q68DY1 528 aa12.96□□□□□ -0.33
USP44-203ENST00000537435 DNM1P46Q6ZS02 220 aa12.96□□□□□ -0.33
USP44-203ENST00000537435 SPICQ8N5J4 248 aa12.96□□□□□ -0.33
USP44-203ENST00000537435 RLN3Q8WXF3 142 aa12.96□□□□□ -0.33
USP44-203ENST00000537435 C4orf45Q96LM5 186 aa12.96□□□□□ -0.33
USP44-203ENST00000537435 DCBLD2Q96PD2 775 aa12.96□□□□□ -0.33
USP44-203ENST00000537435 UTP23Q9BRU9 249 aaKnown RBP12.96□□□□□ -0.33
USP44-203ENST00000537435 SEMA4CQ9C0C4 833 aa12.96□□□□□ -0.33
USP44-203ENST00000537435 NRSN2Q9GZP1 204 aa12.96□□□□□ -0.33
USP44-203ENST00000537435 GPN1Q9HCN4 374 aaPredicted RBP12.96□□□□□ -0.33
USP44-203ENST00000537435 PDE7BQ9NP56 450 aa12.96□□□□□ -0.33
USP44-203ENST00000537435 TMEM131Q92545 1883 aa12.96□□□□□ -0.34
USP44-203ENST00000537435 CDC14CA4D256 554 aa12.96□□□□□ -0.34
USP44-203ENST00000537435 ZSCAN5BA6NJL1 495 aa12.96□□□□□ -0.34
USP44-203ENST00000537435 SHISA7A6NL88 538 aa12.96□□□□□ -0.34
USP44-203ENST00000537435 SHOXO15266 292 aa12.96□□□□□ -0.34
USP44-203ENST00000537435 RBBP9O75884 186 aa12.96□□□□□ -0.34
USP44-203ENST00000537435 BGLAPP02818 100 aa12.96□□□□□ -0.34
USP44-203ENST00000537435 CSRP1P21291 193 aaKnown RBP12.96□□□□□ -0.34
USP44-203ENST00000537435 CXCR1P25024 350 aa12.96□□□□□ -0.34
USP44-203ENST00000537435 RASGEF1BQ0VAM2 473 aa12.96□□□□□ -0.34
USP44-203ENST00000537435 KCNAB1Q14722 419 aa12.96□□□□□ -0.34
USP44-203ENST00000537435 PCGF3Q3KNV8 242 aa12.96□□□□□ -0.34
USP44-203ENST00000537435 COMMD7Q86VX2 200 aa12.96□□□□□ -0.34
USP44-203ENST00000537435 FAM160A2Q8N612 972 aaPredicted RBP12.96□□□□□ -0.34
USP44-203ENST00000537435 UXS1Q8NBZ7 420 aa12.96□□□□□ -0.34
USP44-203ENST00000537435 OR51D1Q8NGF3 324 aa12.96□□□□□ -0.34
USP44-203ENST00000537435 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.96□□□□□ -0.34
USP44-203ENST00000537435 ATOH1Q92858 354 aaPredicted RBP12.96□□□□□ -0.34
USP44-203ENST00000537435 ADIPOR1Q96A54 375 aa12.96□□□□□ -0.34
USP44-203ENST00000537435 MARVELD3Q96A59 401 aa12.96□□□□□ -0.34
USP44-203ENST00000537435 FOXN4Q96NZ1 517 aa12.96□□□□□ -0.34
USP44-203ENST00000537435 C12orf10Q9HB07 376 aa12.96□□□□□ -0.34
USP44-203ENST00000537435 MRTO4Q9UKD2 239 aaKnown RBP12.96□□□□□ -0.34
USP44-203ENST00000537435 CACNA1IQ9P0X4 2223 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 PLGP00747 810 aaPredicted RBP12.95□□□□□ -0.34
USP44-203ENST00000537435 HLA-DQA2P01906 255 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 PDGFAP04085 211 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 IL5P05113 134 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 SLC6A8P48029 635 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 MECP2P51608 486 aaKnown RBP12.95□□□□□ -0.34
USP44-203ENST00000537435 EFNB2P52799 333 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 BIKQ13323 160 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 TTLL10Q6ZVT0 673 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 NUP54Q7Z3B4 507 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 OTOSQ8NHW6 89 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 LMX1AQ8TE12 382 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 TSEN15Q8WW01 171 aaKnown RBP12.95□□□□□ -0.34
USP44-203ENST00000537435 MCHR2Q969V1 340 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 ELOVL3Q9HB03 270 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 MAB21L2Q9Y586 359 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 ALPK2Q86TB3 2170 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 CIB4A0PJX0 185 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 FITM1A5D6W6 292 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 LILRA5A6NI73 299 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 H7C417 338 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 PYCARD-AS1I3L0S3 204 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 I3L521 148 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 XKRYO14609 159 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 PHYHO14832 338 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 NUDT14O95848 222 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 GIPP09681 153 aaPredicted RBP12.95□□□□□ -0.34
USP44-203ENST00000537435 CENPAP49450 140 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 SCAND1P57086 179 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 OPCMLQ14982 345 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 ELOCQ15369 112 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 MEP1BQ16820 701 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 SLC35D2Q76EJ3 337 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.95□□□□□ -0.34
USP44-203ENST00000537435 MARCH3Q86UD3 253 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 OR52B4Q8NGK2 314 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 SLC25A36Q96CQ1 311 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 WDR89Q96FK6 387 aaPredicted RBP12.95□□□□□ -0.34
USP44-203ENST00000537435 MTFP1Q9UDX5 166 aa12.95□□□□□ -0.34
USP44-203ENST00000537435 TLCD2A6NGC4 264 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 HSPB2A8KAH6 182 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 SNRPGP15A8MWD9 76 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 CTAG2O75638 210 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 TPPPO94811 219 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 WISP1O95388 367 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 HRGP04196 525 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 IGKV3-11P04433 115 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 IL12BP29460 328 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 FAUP35544 74 aaKnown RBP12.94□□□□□ -0.34
USP44-203ENST00000537435 HSPB2Q16082 182 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 ANKRD16Q6P6B7 361 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 OR4C16Q8NGL9 310 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 ZNF721Q8TF20 911 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 METTL21AQ8WXB1 218 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 ELMOD3Q96FG2 381 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 OR8B4Q96RC9 309 aa12.94□□□□□ -0.34
USP44-203ENST00000537435 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms