RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 MPZL1O95297 269 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 FOLR1P15328 257 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 ACAA2P42765 397 aaKnown RBP1.99□□□□□ -2.09
CCDC7-208ENST00000537047 NPBWR2P48146 333 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 ARG2P78540 354 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 SYCNQ0VAF6 134 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 ARHGAP19Q14CB8 494 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 RABL6Q3YEC7 729 aaPredicted RBP1.99□□□□□ -2.09
CCDC7-208ENST00000537047 KCTD21Q4G0X4 260 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 VAX1Q5SQQ9 334 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 OR4F3Q6IEY1 312 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 BHLHA15Q7RTS1 189 aaPredicted RBP1.99□□□□□ -2.09
CCDC7-208ENST00000537047 C15orf56Q8N910 161 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 ZNF557Q8N988 423 aaPredicted RBP1.99□□□□□ -2.09
CCDC7-208ENST00000537047 OR2G2Q8NGZ5 317 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 MAGEE2Q8TD90 523 aaPredicted RBP1.99□□□□□ -2.09
CCDC7-208ENST00000537047 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.99□□□□□ -2.09
CCDC7-208ENST00000537047 OR8B4Q96RC9 309 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 COPS8Q99627 209 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 SH3GL3Q99963 347 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 RAB33BQ9H082 229 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 UGT1A7Q9HAW7 530 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 UGT1A10Q9HAW8 530 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 UGT1A8Q9HAW9 530 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 POLE4Q9NR33 117 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 SMOXQ9NWM0 555 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 DDX49Q9Y6V7 483 aaKnown RBP1.99□□□□□ -2.09
CCDC7-208ENST00000537047 CEMIPQ8WUJ3 1361 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.98□□□□□ -2.09
CCDC7-208ENST00000537047 IGLV3-12A0A075B6K2 115 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 IGHV5-10-1A0A0J9YXX1 117 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 TMEM223A0PJW6 202 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 RPL36A-HNRNPH2H7BZ11 118 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 K7EPI3 171 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 PEX11AO75192 247 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 RHOBTB1O94844 696 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 CLDN9O95484 217 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 IL4P05112 153 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 FGF1P05230 155 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 HEXBP07686 556 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 LINC00869P0C866 280 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 HSPA5P11021 654 aaKnown RBP1.98□□□□□ -2.09
CCDC7-208ENST00000537047 ATP5C1P36542 298 aaKnown RBP1.98□□□□□ -2.09
CCDC7-208ENST00000537047 FDFT1P37268 417 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 OPRD1P41143 372 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 GRIA1P42261 906 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 DUSP3P51452 185 aaPredicted RBP1.98□□□□□ -2.09
CCDC7-208ENST00000537047 ESRRGP62508 458 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 CDK16Q00536 496 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 FGL1Q08830 312 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 PIGHQ14442 188 aaPredicted RBP1.98□□□□□ -2.09
CCDC7-208ENST00000537047 FAM78AQ5JUQ0 283 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 ZNF684Q5T5D7 378 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 Q6ZPB1 254 aaPredicted RBP1.98□□□□□ -2.09
CCDC7-208ENST00000537047 NCCRP1Q6ZVX7 275 aaPredicted RBP1.98□□□□□ -2.09
CCDC7-208ENST00000537047 OAFQ86UD1 273 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 PRSS58Q8IYP2 241 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 LGI3Q8N145 548 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 OR4S2Q8NH73 311 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 EMG1Q92979 244 aaKnown RBP1.98□□□□□ -2.09
CCDC7-208ENST00000537047 STMN2Q93045 179 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 L3HYPDHQ96EM0 354 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 WFIKKN1Q96NZ8 548 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 CHAC1Q9BUX1 264 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 PARP12Q9H0J9 701 aaKnown RBP1.98□□□□□ -2.09
CCDC7-208ENST00000537047 AZI2Q9H6S1 392 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 ZNF586Q9NXT0 402 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 SH3BGRL2Q9UJC5 107 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 KIAA1257Q9ULG3 409 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 CARHSP1Q9Y2V2 147 aaKnown RBP1.98□□□□□ -2.09
CCDC7-208ENST00000537047 AP1M2Q9Y6Q5 423 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 NID2Q14112 1375 aa1.98□□□□□ -2.09
CCDC7-208ENST00000537047 IGKV1D-13A0A0B4J2D9 117 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 SGK1O00141 431 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 DYNC1I1O14576 645 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 ANGPT2O15123 496 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 SMPD2O60906 423 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 HLA-DPB1P04440 258 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 OR56A5P0C7T3 313 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 IGKV1-13P0DP09 117 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 CD86P42081 329 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 CSNK1A1P48729 337 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 ATP1B3P54709 279 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 PITPNAQ00169 270 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 ELP6Q0PNE2 266 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 MRPL28Q13084 256 aaKnown RBP1.97□□□□□ -2.09
CCDC7-208ENST00000537047 DGUOKQ16854 277 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 ENPP6Q6UWR7 440 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 KDM7AQ6ZMT4 941 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 VSTM4Q8IW00 320 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 OR5D13Q8NGL4 314 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 LRRC58Q96CX6 371 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 RBMXL1Q96E39 390 aaKnown RBP1.97□□□□□ -2.09
CCDC7-208ENST00000537047 DTNBP1Q96EV8 351 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 MS4A4EQ96PG1 132 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 DOK1Q99704 481 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 PARD6BQ9BYG5 372 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 MFFQ9GZY8 342 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 RMND5AQ9H871 391 aa1.97□□□□□ -2.09
CCDC7-208ENST00000537047 CTSFQ9UBX1 484 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms