RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 TMEM255AQ5JRV8 349 aa11.91□□□□□ -0.5
LDLR-203ENST00000535915 OTPQ5XKR4 325 aa11.91□□□□□ -0.5
LDLR-203ENST00000535915 NUP54Q7Z3B4 507 aa11.91□□□□□ -0.5
LDLR-203ENST00000535915 OR8H1Q8NGG4 311 aa11.91□□□□□ -0.5
LDLR-203ENST00000535915 OR8K3Q8NH51 312 aa11.91□□□□□ -0.5
LDLR-203ENST00000535915 LRRC20Q8TCA0 184 aa11.91□□□□□ -0.5
LDLR-203ENST00000535915 PIGKQ92643 395 aa11.91□□□□□ -0.5
LDLR-203ENST00000535915 ULBP3Q9BZM4 244 aa11.91□□□□□ -0.5
LDLR-203ENST00000535915 RAB33BQ9H082 229 aa11.91□□□□□ -0.5
LDLR-203ENST00000535915 ZNF576Q9H609 170 aa11.91□□□□□ -0.5
LDLR-203ENST00000535915 TAS2R5Q9NYW4 299 aa11.91□□□□□ -0.5
LDLR-203ENST00000535915 NUP50Q9UKX7 468 aa11.91□□□□□ -0.5
LDLR-203ENST00000535915 RNF215Q9Y6U7 377 aa11.91□□□□□ -0.5
LDLR-203ENST00000535915 FREM3P0C091 2139 aa11.91□□□□□ -0.5
LDLR-203ENST00000535915 TRAV36DV7A0A075B6V5 113 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 TEX51A0A1B0GUA7 166 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 OR4C45A6NMZ5 311 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 SULT1B1O43704 296 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 BGLAPP02818 100 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 NAGAP17050 411 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 ATF4P18848 351 aaPredicted RBP11.9□□□□□ -0.5
LDLR-203ENST00000535915 FBLP22087 321 aaKnown RBP11.9□□□□□ -0.5
LDLR-203ENST00000535915 LRRC69Q6ZNQ3 347 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 KANSL1Q7Z3B3 1105 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 DND1Q8IYX4 353 aaKnown RBP11.9□□□□□ -0.5
LDLR-203ENST00000535915 OR11G2Q8NGC1 345 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 OR11H4Q8NGC9 324 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 OR51A4Q8NGJ6 313 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 OR10AC1Q8NH08 325 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 METTL21AQ8WXB1 218 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 TMEM106AQ96A25 262 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 MIB2Q96AX9 1013 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 HAVCR1Q96D42 359 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 MVB12AQ96EY5 273 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 FOXN4Q96NZ1 517 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 MNTQ99583 582 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 OR10A4Q9H209 315 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 COPS7AQ9UBW8 275 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 ARID1BQ8NFD5 2236 aaPredicted RBP11.9□□□□□ -0.5
LDLR-203ENST00000535915 TRAV8-7A0A075B6U6 113 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 TCRBV16S1A1N1A0A5B0 115 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 TMEM212A6NML5 194 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 CDC40O60508 579 aaKnown RBP eCLIP11.9□□□□□ -0.5
LDLR-203ENST00000535915 HPXP02790 462 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 SULT1A3P0DMM9 295 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 SULT1A4P0DMN0 295 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 GP1BBP13224 206 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 PGCP20142 388 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 PSMB1P20618 241 aaKnown RBP11.9□□□□□ -0.5
LDLR-203ENST00000535915 TOR2AQ5JU69 321 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 LRRN1Q6UXK5 716 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 ZNF782Q6ZMW2 699 aaPredicted RBP11.9□□□□□ -0.5
LDLR-203ENST00000535915 MAMDC2Q7Z304 686 aaPredicted RBP11.9□□□□□ -0.5
LDLR-203ENST00000535915 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.9□□□□□ -0.5
LDLR-203ENST00000535915 LRRTM1Q86UE6 522 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 EID2Q8N6I1 236 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 OR1L3Q8NH93 324 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 DAZLQ92904 295 aaKnown RBP11.9□□□□□ -0.5
LDLR-203ENST00000535915 PMEPA1Q969W9 287 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 RELTQ969Z4 430 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 AMELYQ99218 206 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 ZNF304Q9HCX3 659 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 ZNF275Q9NSD4 429 aaPredicted RBP11.9□□□□□ -0.5
LDLR-203ENST00000535915 TAS2R10Q9NYW0 307 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 KCNG2Q9UJ96 466 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 CA14Q9ULX7 337 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 ETV7Q9Y603 341 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 MTCH2Q9Y6C9 303 aa11.9□□□□□ -0.5
LDLR-203ENST00000535915 MEIKINA0A087WXM9 373 aa11.9□□□□□ -0.51
LDLR-203ENST00000535915 NAP1L6A6NFF2 107 aa11.9□□□□□ -0.51
LDLR-203ENST00000535915 TSPAN2O60636 221 aa11.9□□□□□ -0.51
LDLR-203ENST00000535915 ZNF254O75437 659 aa11.9□□□□□ -0.51
LDLR-203ENST00000535915 ZNF432O94892 652 aa11.9□□□□□ -0.51
LDLR-203ENST00000535915 WISP1O95388 367 aa11.9□□□□□ -0.51
LDLR-203ENST00000535915 SRFP11831 508 aa11.9□□□□□ -0.51
LDLR-203ENST00000535915 VEGFCP49767 419 aa11.9□□□□□ -0.51
LDLR-203ENST00000535915 P2RX1P51575 399 aa11.9□□□□□ -0.51
LDLR-203ENST00000535915 EPHA4P54764 986 aa11.9□□□□□ -0.51
LDLR-203ENST00000535915 C1orf189Q5VU69 101 aa11.9□□□□□ -0.51
LDLR-203ENST00000535915 OGFOD3Q6PK18 319 aa11.9□□□□□ -0.51
LDLR-203ENST00000535915 CHRDL2Q6WN34 429 aa11.9□□□□□ -0.51
LDLR-203ENST00000535915 SLC29A4Q7RTT9 530 aa11.9□□□□□ -0.51
LDLR-203ENST00000535915 PRSS35Q8N3Z0 413 aa11.9□□□□□ -0.51
LDLR-203ENST00000535915 ZNF417Q8TAU3 575 aa11.9□□□□□ -0.51
LDLR-203ENST00000535915 GPR148Q8TDV2 347 aa11.9□□□□□ -0.51
LDLR-203ENST00000535915 WWTR1Q9GZV5 400 aa11.9□□□□□ -0.51
LDLR-203ENST00000535915 CPAMD8Q8IZJ3 1885 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 A0A1B0GVI7 797 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 LEUTXA8MZ59 168 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 ALG1L2C9J202 215 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 PHYHO14832 338 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 EIF4E2O60573 245 aaKnown RBP11.89□□□□□ -0.51
LDLR-203ENST00000535915 POU3F3P20264 500 aaPredicted RBP11.89□□□□□ -0.51
LDLR-203ENST00000535915 MRPS10P82664 201 aaKnown RBP11.89□□□□□ -0.51
LDLR-203ENST00000535915 RASGEF1BQ0VAM2 473 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 CBFBQ13951 182 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 ARHGAP40Q5TG30 622 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 PIAS4Q8N2W9 510 aaPredicted RBP11.89□□□□□ -0.51
LDLR-203ENST00000535915 OTOSQ8NHW6 89 aa11.89□□□□□ -0.51
LDLR-203ENST00000535915 GPR137Q96N19 417 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms