RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 SMLR1H3BR10 107 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 XKRYO14609 159 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 GSTZ1O43708 216 aaPredicted RBP12.06□□□□□ -0.48
VPS33B-202ENST00000535906 TACSTD2P09758 323 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 ALOX5APP20292 161 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 RPL27P61353 136 aaKnown RBP12.06□□□□□ -0.48
VPS33B-202ENST00000535906 GALK2Q01415 458 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 BTBD16Q32M84 506 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 UBE2NLQ5JXB2 153 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 LAMTOR1Q6IAA8 161 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 ESPNLQ6ZVH7 1005 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 ZNF671Q8TAW3 534 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 NUBPLQ8TB37 319 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 ZNF519Q8TB69 540 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 LGALS14Q8TCE9 139 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 DEDD2Q8WXF8 326 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 C8orf44Q96CB5 159 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 HYLS1Q96M11 299 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 SLC25A18Q9H1K4 315 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 OCIAD1Q9NX40 245 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 ANKRD10Q9NXR5 420 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 RABL2AQ9UBK7 228 aaPredicted RBP12.06□□□□□ -0.48
VPS33B-202ENST00000535906 PPIEQ9UNP9 301 aaKnown RBP12.06□□□□□ -0.48
VPS33B-202ENST00000535906 RABL2BQ9UNT1 228 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 PRSS37A4D1T9 235 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 VSTM2BA6NLU5 285 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 ALX3O95076 343 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 CFIP05156 583 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 IL11P20809 199 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 ALKBH1Q13686 389 aaKnown RBP12.06□□□□□ -0.48
VPS33B-202ENST00000535906 FCN2Q15485 313 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 FAM220AQ7Z4H9 259 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 ZNF417Q8TAU3 575 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 THEM6Q8WUY1 208 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 ADAMTS14Q8WXS8 1223 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 PMEPA1Q969W9 287 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 KLHL15Q96M94 604 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 DERL3Q96Q80 235 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 ZNF587Q96SQ5 575 aaPredicted RBP12.06□□□□□ -0.48
VPS33B-202ENST00000535906 INTS14Q96SY0 518 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 AMELYQ99218 206 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 SPSB2Q99619 263 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 IKZF2Q9UKS7 526 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 CPAMD8Q8IZJ3 1885 aa12.06□□□□□ -0.48
VPS33B-202ENST00000535906 PLPP3O14495 311 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 PDCD5O14737 125 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 TDGF1P13385 188 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 STOMP27105 288 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 GIFP27352 417 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 INSM1Q01101 510 aaPredicted RBP12.05□□□□□ -0.48
VPS33B-202ENST00000535906 C17orf67Q0P5P2 114 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 RNASE12Q5GAN4 147 aaKnown RBP12.05□□□□□ -0.48
VPS33B-202ENST00000535906 FAM69BQ5VUD6 431 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 FAM205BPQ63HN1 556 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 ARSKQ6UWY0 536 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 WDR5BQ86VZ2 330 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 PPP1R3BQ86XI6 285 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 MISPQ8IVT2 679 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 KDM8Q8N371 416 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 STK35Q8TDR2 534 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 SMIM4Q8WVI0 70 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 EDAQ92838 391 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 HGDQ93099 445 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 IER2Q9BTL4 223 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 CACNG6Q9BXT2 260 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 TXNIPQ9H3M7 391 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 MED11Q9P086 117 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 KCNG2Q9UJ96 466 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 B9D1Q9UPM9 204 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 HRH3Q9Y5N1 445 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 TMEM127O75204 238 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 AHSA1O95433 338 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 HLA-DOBP13765 273 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 RAG2P55895 527 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 DYRK1AQ13627 763 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 KLF9Q13886 244 aaPredicted RBP12.05□□□□□ -0.48
VPS33B-202ENST00000535906 ETFDHQ16134 617 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 SLC22A10Q63ZE4 541 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 THOC7Q6I9Y2 204 aaKnown RBP12.05□□□□□ -0.48
VPS33B-202ENST00000535906 LRRC69Q6ZNQ3 347 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 CREB3L2Q70SY1 520 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 CPEB2Q7Z5Q1 589 aaKnown RBP12.05□□□□□ -0.48
VPS33B-202ENST00000535906 OR5AK2Q8NH90 309 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 ARL5BQ96KC2 179 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 OR2M2Q96R28 347 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 VDAC3Q9Y277 283 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 HSPB11Q9Y547 144 aa12.05□□□□□ -0.48
VPS33B-202ENST00000535906 TRABD2BA6NFA1 517 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 ANKUB1A6NFN9 424 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 IFITM5A6NNB3 132 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 PATE3B3GLJ2 98 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.04□□□□□ -0.48
VPS33B-202ENST00000535906 FTCDNL1E5RQL4 147 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 AIPO00170 330 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 FABP7O15540 132 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 AKR7A2O43488 359 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 SLC16A7O60669 478 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 OR6A2O95222 327 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 MELKQ14680 651 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 PHF19Q5T6S3 580 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms