RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ZDHHC24Q6UX98 284 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 GDPGP1Q6ZNW5 385 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 SLC22A9Q8IVM8 553 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 CADM2Q8N3J6 435 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 FITM2Q8N6M3 262 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 ZNF283Q8N7M2 679 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 OR1J1Q8NGS3 322 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 MFSD8Q8NHS3 518 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 IPCEF1Q8WWN9 437 aaPredicted RBP6.88□□□□□ -1.31
CLIP1-206ENST00000535290 THOC1Q96FV9 657 aaKnown RBP6.88□□□□□ -1.31
CLIP1-206ENST00000535290 TXNDC15Q96J42 360 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 SLC35G5Q96KT7 338 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 B9D2Q9BPU9 175 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 NUDT16L1Q9BRJ7 211 aaKnown RBP6.88□□□□□ -1.31
CLIP1-206ENST00000535290 BCL2L14Q9BZR8 327 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 TUBB1Q9H4B7 451 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 MSL2Q9HCI7 577 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 ACOXLQ9NUZ1 547 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 RLIMQ9NVW2 624 aa6.88□□□□□ -1.31
CLIP1-206ENST00000535290 GMPR2Q9P2T1 348 aaKnown RBP6.88□□□□□ -1.31
CLIP1-206ENST00000535290 DNAH1Q9P2D7 4330 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 A0A0U1RQK1 487 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 RNF103-CHMP3A0A140T963 221 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 PLSCR5A0PG75 271 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 M0R082 166 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 LSM1O15116 133 aaKnown RBP6.87□□□□□ -1.31
CLIP1-206ENST00000535290 MGRN1O60291 552 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 ZNF205O95201 554 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 AHSA1O95433 338 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 SNAP29O95721 258 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 HPRP00739 348 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 INHBAP08476 426 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 LINC00032P0C843 101 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 HLA-DOBP13765 273 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 IGLL1P15814 213 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 TCP1P17987 556 aaKnown RBP6.87□□□□□ -1.31
CLIP1-206ENST00000535290 UQCRC2P22695 453 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 ACAA2P42765 397 aaKnown RBP6.87□□□□□ -1.31
CLIP1-206ENST00000535290 RPS5P46782 204 aaKnown RBP6.87□□□□□ -1.31
CLIP1-206ENST00000535290 KRTAP10-11P60412 298 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 TNFAIP6P98066 277 aaPredicted RBP6.87□□□□□ -1.31
CLIP1-206ENST00000535290 EGR4Q05215 589 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 PTGR1Q14914 329 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 GALNTL6Q49A17 601 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 TTMPQ5BVD1 217 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 MRPL2Q5T653 305 aaKnown RBP6.87□□□□□ -1.31
CLIP1-206ENST00000535290 ATAD3BQ5T9A4 648 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 ATG16L1Q676U5 607 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 ZCCHC23Q6ZST2 131 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 LDLRAD3Q86YD5 345 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 KLBQ86Z14 1044 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 ZNF101Q8IZC7 436 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 CLECL1Q8IZS7 167 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 MUC20Q8N307 709 aaPredicted RBP6.87□□□□□ -1.31
CLIP1-206ENST00000535290 MIER2Q8N344 545 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 KRTCAP2Q8N6L1 136 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 ZNF417Q8TAU3 575 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 MIPOL1Q8TD10 442 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 COQ8BQ96D53 544 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 LRR1Q96L50 414 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 TBX15Q96SF7 602 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 ZNF587Q96SQ5 575 aaPredicted RBP6.87□□□□□ -1.31
CLIP1-206ENST00000535290 ARHGDIGQ99819 225 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 SH3GL3Q99963 347 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 PCGF1Q9BSM1 259 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 MECRQ9BV79 373 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 CDADC1Q9BWV3 514 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 ULBP2Q9BZM5 246 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 MMP28Q9H239 520 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 TCF7L2Q9NQB0 619 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 FBLN5Q9UBX5 448 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 GIMAP2Q9UG22 337 aa6.87□□□□□ -1.31
CLIP1-206ENST00000535290 LOC102725191A0A1B0GVB3 256 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 C22orf46C9J442 243 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 RAD51CO43502 376 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 AKAP8O43823 692 aaKnown RBP6.86□□□□□ -1.31
CLIP1-206ENST00000535290 C1QCP02747 245 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 PRG2P13727 222 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 UQCRBP14927 111 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 RPS2P15880 293 aaKnown RBP6.86□□□□□ -1.31
CLIP1-206ENST00000535290 GTF2E2P29084 291 aaKnown RBP6.86□□□□□ -1.31
CLIP1-206ENST00000535290 GABRA5P31644 462 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 CFHR2P36980 270 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 TBC1D28Q2M2D7 210 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 SMU1Q2TAY7 513 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 NSUN5P1Q3KNT7 163 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 ZNF718Q3SXZ3 478 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 GPAT3Q53EU6 434 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 CASC10Q5T4H9 136 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 WBP2NLQ6ICG8 309 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 PGBD2Q6P3X8 592 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 NHLRC1Q6VVB1 395 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 WDR88Q6ZMY6 472 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 FRMD7Q6ZUT3 714 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 SLC22A24Q8N4F4 322 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 ANKFN1Q8N957 763 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 OR4S1Q8NGB4 309 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 OR6N1Q8NGY5 312 aa6.86□□□□□ -1.31
CLIP1-206ENST00000535290 PNPT1Q8TCS8 783 aaKnown RBP6.86□□□□□ -1.31
CLIP1-206ENST00000535290 KLF14Q8TD94 323 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms