RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 ZNF672Q499Z4 452 aaPredicted RBP7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 TIMM23BQ5SRD1 257 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 UBE2UQ5VVX9 321 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 SEZ6L2Q6UXD5 910 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 CASP12Q6UXS9 341 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 SPATC1Q76KD6 591 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 ZNF433Q8N7K0 673 aaPredicted RBP7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 POC5Q8NA72 575 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 BPIFB6Q8NFQ5 453 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 OR52N5Q8NH56 324 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 ZFAND1Q8TCF1 268 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 SLC38A5Q8WUX1 472 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 IGFBPL1Q8WX77 278 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 PMM1Q92871 262 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 YIPF6Q96EC8 236 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 TMEM80Q96HE8 168 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 RNF170Q96K19 258 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 NAA11Q9BSU3 229 aaPredicted RBP7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 ZNF556Q9HAH1 456 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 CCDC59Q9P031 241 aaKnown RBP7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 TRAPPC4Q9Y296 219 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 VPS13CQ709C8 3753 aa7.53□□□□□ -1.2
SFSWAP-202ENST00000535202 ACANP16112 2415 aa7.52□□□□□ -1.2
SFSWAP-202ENST00000535202 A0A1W2PP18 115 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 A0A1W2PR80 420 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 CDHR4A6H8M9 788 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 OR5H1A6NKK0 313 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 FAM171A2A8MVW0 826 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 hCG_2039718K7EN88 272 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 ABCD4O14678 606 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 EIF1BO60739 113 aaKnown RBP7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 NOS1APO75052 506 aaPredicted RBP7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 TIPRLO75663 272 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 MFN2O95140 757 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 AKR7A3O95154 331 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 LY6G6DO95868 133 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 HEXAP06865 529 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 THBS1P07996 1170 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 SOD3P08294 240 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 NUDT7P0C024 238 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 PAX1P15863 534 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 PCMT1P22061 227 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 EEF1B2P24534 225 aaKnown RBP7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 NTF4P34130 210 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 ALDH3A2P51648 485 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 UGT2B15P54855 530 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 CDH11P55287 796 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 CXCR4P61073 352 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 TNK1Q13470 666 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 OR7A5Q15622 319 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 ZNF311Q5JNZ3 666 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 OTUD3Q5T2D3 398 aaPredicted RBP7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 SYT6Q5T7P8 510 aaPredicted RBP7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 C9orf135Q5VTT2 229 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 FAM205BPQ63HN1 556 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 WBP2NLQ6ICG8 309 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 PAQR6Q6TCH4 344 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 CCBE1Q6UXH8 406 aaPredicted RBP7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 NOXA1Q86UR1 476 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 P2RY8Q86VZ1 359 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 ADGRG5Q8IZF4 528 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 TCTE3Q8IZS6 198 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 C8orf59Q8N0T1 100 aaPredicted RBP7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 LINC00469Q8N7U9 141 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 OR52E4Q8NGH9 312 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 TSPEARQ8WU66 669 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 SMAP2Q8WU79 429 aaPredicted RBP7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 FBLIM1Q8WUP2 373 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 GTF2H4Q92759 462 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 MAL2Q969L2 176 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 GTPBP3Q969Y2 492 aaKnown RBP7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 MAP6Q96JE9 813 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 ST6GAL2Q96JF0 529 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 KCTD14Q9BQ13 255 aaPredicted RBP7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 TAPBPLQ9BX59 468 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 SLIRPQ9GZT3 109 aaKnown RBP7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 ADAM19Q9H013 955 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 ZNF701Q9NV72 531 aaPredicted RBP7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 TMEM45AQ9NWC5 275 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 ASB6Q9NWX5 421 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 ADPRHL2Q9NX46 363 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 THUMPD1Q9NXG2 353 aaKnown RBP7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 MRPL39Q9NYK5 338 aaKnown RBP7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 TAS2R16Q9NYV7 291 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 USE1Q9NZ43 259 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 EIF3KQ9UBQ5 218 aaKnown RBP7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 UPB1Q9UBR1 384 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 MALT1Q9UDY8 824 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 WARS2Q9UGM6 360 aaKnown RBP7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 SLC9A8Q9Y2E8 581 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 PCDHB14Q9Y5E9 798 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 MAGED1Q9Y5V3 778 aaPredicted RBP7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 FLVCR1Q9Y5Y0 555 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 HSPE1-MOB4S4R3N1 261 aa7.52□□□□□ -1.21
SFSWAP-202ENST00000535202 ROS1P08922 2347 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 A0A096LPI6 279 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 ARPC4-TTLL3A0A0A6YYG9 625 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 A0A0G2JPF8 293 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 PRORSD1PA6NEY8 169 aa7.51□□□□□ -1.21
SFSWAP-202ENST00000535202 LIPT2A6NK58 231 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms