RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 SLC2A3P11169 496 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 HLA-EP13747 358 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 ANXA8P13928 327 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 ZNF30P17039 623 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 NCF2P19878 526 aaPredicted RBP2.82□□□□□ -1.96
USP48-215ENST00000534705 AADACP22760 399 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 HTR2AP28223 471 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 RPA3P35244 121 aaPredicted RBP2.82□□□□□ -1.96
USP48-215ENST00000534705 HMGCLP35914 325 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 CAPGP40121 348 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 ETV6P41212 452 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 SOX3P41225 446 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 SLCO1A2P46721 670 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 NPY2RP49146 381 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 CEBPDP49716 269 aaPredicted RBP2.82□□□□□ -1.96
USP48-215ENST00000534705 PLK1P53350 603 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 DCDC1P59894 354 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 KRTAP12-2P59991 146 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 MS4A2Q01362 244 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 SLC3A1Q07837 685 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 PMS2P3Q13401 168 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 TRIP10Q15642 601 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 DPYSL2Q16555 572 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 RBBP7Q16576 425 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 HADHQ16836 314 aaKnown RBP2.82□□□□□ -1.96
USP48-215ENST00000534705 SLC25A52Q3SY17 297 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 MPPE1Q53F39 396 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 PIGGQ5H8A4 983 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 TCTEX1D4Q5JR98 221 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 ANXA8L1Q5VT79 327 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 PRAMEF20Q5VT98 475 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 C1orf146Q5VVC0 180 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 CCDC137Q6PK04 289 aaKnown RBP2.82□□□□□ -1.96
USP48-215ENST00000534705 ZNF571Q7Z3V5 609 aaPredicted RBP2.82□□□□□ -1.96
USP48-215ENST00000534705 HDDC2Q7Z4H3 204 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 ASPGQ86U10 573 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 AKAP14Q86UN6 197 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 ZFAND4Q86XD8 727 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 CDC20BQ86Y33 519 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 SLC22A9Q8IVM8 553 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 MCOLN2Q8IZK6 566 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 APCDD1Q8J025 514 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 METTL4Q8N3J2 472 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 SNX31Q8N9S9 440 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 SIDT2Q8NBJ9 832 aaKnown RBP2.82□□□□□ -1.96
USP48-215ENST00000534705 TMEM35BQ8NCS4 154 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 BHLHE23Q8NDY6 225 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 OR4D10Q8NGI6 311 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 OR6Q1Q8NGQ2 317 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 OR4A16Q8NH70 328 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 FANK1Q8TC84 345 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 PHF10Q8WUB8 498 aaKnown RBP2.82□□□□□ -1.96
USP48-215ENST00000534705 RAB2BQ8WUD1 216 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 PYDC1Q8WXC3 89 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 GGHQ92820 318 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 FAM46BQ96A09 425 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 FAM131CQ96AQ9 280 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 RASD2Q96D21 266 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 SLC45A3Q96JT2 553 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 FAM218AQ96MZ4 157 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 TAAR6Q96RI8 345 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 COQ7Q99807 217 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 AGPAT1Q99943 283 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 C11orf70Q9BRQ4 267 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 ALG12Q9BV10 488 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 ZNF717Q9BY31 904 aaPredicted RBP2.82□□□□□ -1.96
USP48-215ENST00000534705 PARLQ9H300 379 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 EXO5Q9H790 373 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 ACTR8Q9H981 624 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 HMG20AQ9NP66 347 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 PRSS16Q9NQE7 514 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 SDHAF3Q9NRP4 125 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 ELOVL2Q9NXB9 296 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 IL36AQ9UHA7 158 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 ENOPH1Q9UHY7 261 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 PRPF19Q9UMS4 504 aaKnown RBP2.82□□□□□ -1.96
USP48-215ENST00000534705 PLLPQ9Y342 182 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 GMPPBQ9Y5P6 360 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 SNX10Q9Y5X0 201 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 SLCO1B1Q9Y6L6 691 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 ZZEF1O43149 2961 aa2.82□□□□□ -1.96
USP48-215ENST00000534705 SCN2AQ99250 2005 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 ACACAQ13085 2346 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 NBEAQ8NFP9 2946 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 FAM240BA0A1B0GVZ2 78 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 BCLAF3A2AJT9 711 aaKnown RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 EFCAB10A6NFE3 127 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 NCF1BA6NI72 391 aaPredicted RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 TRPC5OSA6NMA1 111 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 ANKRD30BLA7E2S9 258 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 NCF1CA8MVU1 366 aaPredicted RBP2.81□□□□□ -1.96
USP48-215ENST00000534705 MEI4A8MW99 385 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 A8MX80 341 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 FAM25AB3EWG3 89 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 FAM25CB3EWG5 89 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 FAM25GB3EWG6 89 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 E7ESA3 106 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 ATP6V1G2-DDX39BF2Z307 99 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 GOLGA8SH3BPF8 625 aa2.81□□□□□ -1.96
USP48-215ENST00000534705 SLC1A7O00341 560 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms