RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 ABHD12BQ7Z5M8 362 aaPredicted RBP12.26□□□□□ -0.45
VPS11-205ENST00000534551 PAPD5Q8NDF8 572 aaKnown RBP12.26□□□□□ -0.45
VPS11-205ENST00000534551 GNPDA2Q8TDQ7 276 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 NSMAFQ92636 917 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 MCHR2Q969V1 340 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 ZNF570Q96NI8 536 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 KCNK17Q96T54 332 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 FOXB1Q99853 325 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 NIPSNAP1Q9BPW8 284 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 MMADHCQ9H3L0 296 aaPredicted RBP12.26□□□□□ -0.45
VPS11-205ENST00000534551 PLCE1Q9P212 2302 aa12.26□□□□□ -0.45
VPS11-205ENST00000534551 SPG11Q96JI7 2443 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 DPRXA6NFQ7 191 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 NPIPB13A6NJU9 1138 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 ZNF99A8MXY4 864 aaPredicted RBP12.25□□□□□ -0.45
VPS11-205ENST00000534551 NPIPB4C9JG80 1138 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 ARHGEF9O43307 516 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 PATE4P0C8F1 98 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 HOXC12P31275 282 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 CDAP32320 146 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 PRPS1P60891 318 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 TGFBR3Q03167 851 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 TSPAN31Q12999 210 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 MICAQ29983 383 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 BEX5Q5H9J7 111 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 CLEC12AQ5QGZ9 265 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 OR7E24Q6IFN5 339 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 ANKRD16Q6P6B7 361 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 SMARCD3Q6STE5 483 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 ZNF813Q6ZN06 617 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 PTCHD4Q6ZW05 846 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 C17orf78Q8N4C9 275 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 PYDC1Q8WXC3 89 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 HSD17B8Q92506 261 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 LRR1Q96L50 414 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 FOXN4Q96NZ1 517 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 GPX7Q96SL4 187 aaPredicted RBP12.25□□□□□ -0.45
VPS11-205ENST00000534551 UBTD1Q9HAC8 227 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 NTN4Q9HB63 628 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 B3GAT2Q9NPZ5 323 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 ZNF224Q9NZL3 707 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 POFUT2Q9Y2G5 429 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 UGT2A1Q9Y4X1 527 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 IER3IP1Q9Y5U9 82 aa12.25□□□□□ -0.45
VPS11-205ENST00000534551 GNGT2O14610 69 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 DHHO43323 396 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 E2F6O75461 281 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 HLA-HP01893 362 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 TP53P04637 393 aaPredicted RBP12.24□□□□□ -0.45
VPS11-205ENST00000534551 PRKACGP22612 351 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 IFNGR2P38484 337 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 CAPZA2P47755 286 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 SH3BGRP55822 239 aaPredicted RBP12.24□□□□□ -0.45
VPS11-205ENST00000534551 ETFDHQ16134 617 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 HIST3H3Q16695 136 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 ANKDD1AQ495B1 522 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 NCMAPQ5T1S8 102 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 ZNF704Q6ZNC4 412 aaPredicted RBP12.24□□□□□ -0.45
VPS11-205ENST00000534551 MDP1Q86V88 176 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 FGFBP3Q8TAT2 258 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 MAGEE2Q8TD90 523 aaPredicted RBP12.24□□□□□ -0.45
VPS11-205ENST00000534551 MUCL1Q96DR8 90 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 FN3KQ9H479 309 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 PLEKHF2Q9H8W4 249 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 NRIP3Q9NQ35 241 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 ARMC1Q9NVT9 282 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 TMEM38BQ9NVV0 291 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 PDP1Q9P0J1 537 aaPredicted RBP12.24□□□□□ -0.45
VPS11-205ENST00000534551 AMDHD2Q9Y303 409 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 CDH10Q9Y6N8 788 aa12.24□□□□□ -0.45
VPS11-205ENST00000534551 NOTCH2Q04721 2471 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 IGHV1-18A0A0C4DH31 117 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 ABCD4O14678 606 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 SDHAP31040 664 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 SLC6A6P31641 620 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 IDH3GP51553 393 aaPredicted RBP12.23□□□□□ -0.45
VPS11-205ENST00000534551 UBE2NP61088 152 aaKnown RBP12.23□□□□□ -0.45
VPS11-205ENST00000534551 NPRL3Q12980 569 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 RFX4Q33E94 735 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 KLHL17Q6TDP4 642 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 B3GLCTQ6Y288 498 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 AMIGO2Q86SJ2 522 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 P2RY8Q86VZ1 359 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 IQCF1Q8N6M8 205 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 ARIH2OSQ8N7S6 290 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 SDR9C7Q8NEX9 313 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 OR4Q3Q8NH05 313 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 GIPC3Q8TF64 312 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 LRTOMTQ8WZ04 291 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 POP5Q969H6 163 aaKnown RBP12.23□□□□□ -0.45
VPS11-205ENST00000534551 ERMAPQ96PL5 475 aaPredicted RBP12.23□□□□□ -0.45
VPS11-205ENST00000534551 FEVQ99581 238 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 SH3GL3Q99963 347 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 ALG12Q9BV10 488 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 IFT27Q9BW83 186 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 SYT4Q9H2B2 425 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 TBC1D23Q9NUY8 699 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 GRHPRQ9UBQ7 328 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 DNAJB9Q9UBS3 223 aa12.23□□□□□ -0.45
VPS11-205ENST00000534551 PLEKHA6Q9Y2H5 1048 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms