RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ELOVL7A1L3X0 281 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 VWC2LB2RUY7 222 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 SLC22A2O15244 555 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 OR7A10O76100 309 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 F13BP05160 661 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 ADRA2AP08913 450 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 PGA4P0DJD7 388 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 PGA3P0DJD8 388 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 IGHV4-31P0DP07 118 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 THRBP10828 461 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 APEHP13798 732 aaKnown RBP13.33□□□□□ -0.28
CPSF1-211ENST00000533492 DAOP14920 347 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 GLRXP35754 106 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 ZNF84P51523 738 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 RPS23P62266 143 aaKnown RBP13.33□□□□□ -0.28
CPSF1-211ENST00000533492 RPL18Q07020 188 aaKnown RBP13.33□□□□□ -0.28
CPSF1-211ENST00000533492 HDDC2Q7Z4H3 204 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 MICU2Q8IYU8 434 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 CDK20Q8IZL9 346 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 POU5F2Q8N7G0 328 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 MRPL24Q96A35 216 aaKnown RBP13.33□□□□□ -0.28
CPSF1-211ENST00000533492 RCN3Q96D15 328 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 SH3GL3Q99963 347 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 BEX2Q9BXY8 128 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 INIPQ9NRY2 104 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 ZNF446Q9NWS9 450 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 ARMCX1Q9P291 453 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 CDC42EP3Q9UKI2 254 aa13.33□□□□□ -0.28
CPSF1-211ENST00000533492 SYNGR3O43761 229 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 LMX1BO60663 402 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 STAMBPO95630 424 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 IGF2P01344 180 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 SERPINA5P05154 406 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 ZNF16P17020 682 aaPredicted RBP13.32□□□□□ -0.28
CPSF1-211ENST00000533492 AQP2P41181 271 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 EVX1P49640 407 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 DAP3P51398 398 aaKnown RBP13.32□□□□□ -0.28
CPSF1-211ENST00000533492 SELENOWP63302 87 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 MYBPC1Q00872 1141 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 ST3GAL3Q11203 375 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 SLC36A2Q495M3 483 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 TMEM53Q6P2H8 277 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 ARPINQ7Z6K5 226 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 DPPA2Q7Z7J5 298 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 SYT14Q8NB59 555 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 RP9Q8TA86 221 aaKnown RBP13.32□□□□□ -0.28
CPSF1-211ENST00000533492 FGFBP3Q8TAT2 258 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 UBASH3BQ8TF42 649 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 MCHR2Q969V1 340 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 ZNF347Q96SE7 839 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 MRPL37Q9BZE1 423 aaKnown RBP13.32□□□□□ -0.28
CPSF1-211ENST00000533492 BPESC1Q9GZL8 116 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 MS4A5Q9H3V2 200 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 CCDC134Q9H6E4 229 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 C20orf141Q9NUB4 165 aa13.32□□□□□ -0.28
CPSF1-211ENST00000533492 STX18Q9P2W9 335 aaKnown RBP13.32□□□□□ -0.28
CPSF1-211ENST00000533492 IGHV4-61A0A0C4DH41 118 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 LOC100289279A0A1B0GTE1 492 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 CENPBD1B2RD01 187 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 M0R233 179 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 CCDC22O60826 627 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 ACADSP16219 412 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 RUNX1T1Q06455 604 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 SLC16A14Q7RTX9 510 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 OR4K5Q8NGD3 323 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 ASB10Q8WXI3 467 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 SYT3Q9BQG1 590 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 SHARPINQ9H0F6 387 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 KCNN2Q9H2S1 579 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 TPK1Q9H3S4 243 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 CDH20Q9HBT6 801 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 TMEM160Q9NX00 188 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 LPAR3Q9UBY5 353 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 REV1Q9UBZ9 1251 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 SLC7A8Q9UHI5 535 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 DUSP13Q9UII6 198 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 KCNS2Q9ULS6 477 aa13.31□□□□□ -0.28
CPSF1-211ENST00000533492 SLC22A23A1A5C7 686 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 GSTA4O15217 222 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 TRMUO75648 421 aaKnown RBP13.3□□□□□ -0.28
CPSF1-211ENST00000533492 PTHP01270 115 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 FAM157CP0CG43 387 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 IFI30P13284 250 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 ZNF23P17027 643 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 SELENOVP59797 346 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 PLP2Q04941 152 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 LAPTM4AQ15012 233 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 HIST3H3Q16695 136 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 NRN1LQ496H8 165 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 FAM166AQ6J272 317 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 ZNF584Q8IVC4 421 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 ZNF786Q8N393 782 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 SLC30A7Q8NEW0 376 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 NOXO1Q8NFA2 376 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 OR1J2Q8NGS2 313 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 MOSPD2Q8NHP6 518 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 LIPHQ8WWY8 451 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 PRRC1Q96M27 445 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 FNDC11Q9BVV2 318 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 MRPL13Q9BYD1 178 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms