RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ARL2BPQ9Y2Y0 163 aa26.24■■□□□ 1.79
SSSCA1-207ENST00000533115 ARFGEF3Q5TH69 2177 aa26.23■■□□□ 1.79
SSSCA1-207ENST00000533115 NPIPB13A6NJU9 1138 aa26.23■■□□□ 1.79
SSSCA1-207ENST00000533115 B9A039 149 aa26.23■■□□□ 1.79
SSSCA1-207ENST00000533115 NPIPB4C9JG80 1138 aa26.23■■□□□ 1.79
SSSCA1-207ENST00000533115 ENTPD5O75356 428 aa26.23■■□□□ 1.79
SSSCA1-207ENST00000533115 TRMUO75648 421 aaKnown RBP26.23■■□□□ 1.79
SSSCA1-207ENST00000533115 PRSS23O95084 383 aa26.23■■□□□ 1.79
SSSCA1-207ENST00000533115 RAB36O95755 333 aa26.23■■□□□ 1.79
SSSCA1-207ENST00000533115 ACADSP16219 412 aa26.23■■□□□ 1.79
SSSCA1-207ENST00000533115 GIPRP48546 466 aa26.23■■□□□ 1.79
SSSCA1-207ENST00000533115 PTDSS1P48651 473 aaKnown RBP26.23■■□□□ 1.79
SSSCA1-207ENST00000533115 DSCR9P59020 149 aa26.23■■□□□ 1.79
SSSCA1-207ENST00000533115 GLYATQ6IB77 296 aa26.23■■□□□ 1.79
SSSCA1-207ENST00000533115 NRMQ8IXM6 262 aa26.23■■□□□ 1.79
SSSCA1-207ENST00000533115 MAPK1IP1LQ8NDC0 245 aa26.23■■□□□ 1.79
SSSCA1-207ENST00000533115 STX18Q9P2W9 335 aaKnown RBP26.23■■□□□ 1.79
SSSCA1-207ENST00000533115 OR8G3PP0DMU2 310 aa26.22■■□□□ 1.79
SSSCA1-207ENST00000533115 MAKP20794 623 aa26.22■■□□□ 1.79
SSSCA1-207ENST00000533115 THBS4P35443 961 aa26.22■■□□□ 1.79
SSSCA1-207ENST00000533115 EFNA4P52798 201 aa26.22■■□□□ 1.79
SSSCA1-207ENST00000533115 MYBPC1Q00872 1141 aa26.22■■□□□ 1.79
SSSCA1-207ENST00000533115 PRKCDQ05655 676 aa26.22■■□□□ 1.79
SSSCA1-207ENST00000533115 EFNB3Q15768 340 aa26.22■■□□□ 1.79
SSSCA1-207ENST00000533115 ALG10Q5BKT4 473 aa26.22■■□□□ 1.79
SSSCA1-207ENST00000533115 ARMC4Q5T2S8 1044 aa26.22■■□□□ 1.79
SSSCA1-207ENST00000533115 CLEC2AQ6UVW9 174 aa26.22■■□□□ 1.79
SSSCA1-207ENST00000533115 CYP4Z1Q86W10 505 aa26.22■■□□□ 1.79
SSSCA1-207ENST00000533115 RNF113BQ8IZP6 322 aaKnown RBP26.22■■□□□ 1.79
SSSCA1-207ENST00000533115 SYT14Q8NB59 555 aa26.22■■□□□ 1.79
SSSCA1-207ENST00000533115 RBM15BQ8NDT2 890 aaKnown RBP26.22■■□□□ 1.79
SSSCA1-207ENST00000533115 ACOT11Q8WXI4 607 aaPredicted RBP26.22■■□□□ 1.79
SSSCA1-207ENST00000533115 TXNIPQ9H3M7 391 aa26.22■■□□□ 1.79
SSSCA1-207ENST00000533115 ENPP4Q9Y6X5 453 aa26.22■■□□□ 1.79
SSSCA1-207ENST00000533115 VSTM5A8MXK1 200 aa26.21■■□□□ 1.79
SSSCA1-207ENST00000533115 FARS2O95363 451 aaKnown RBP26.21■■□□□ 1.79
SSSCA1-207ENST00000533115 SAGP10523 405 aaPredicted RBP26.21■■□□□ 1.79
SSSCA1-207ENST00000533115 DAG1Q14118 895 aa26.21■■□□□ 1.79
SSSCA1-207ENST00000533115 TSEN54Q7Z6J9 526 aaKnown RBP26.21■■□□□ 1.79
SSSCA1-207ENST00000533115 RNF148Q8N7C7 305 aa26.21■■□□□ 1.79
SSSCA1-207ENST00000533115 OR10H5Q8NGA6 315 aa26.21■■□□□ 1.79
SSSCA1-207ENST00000533115 FGFBP3Q8TAT2 258 aa26.21■■□□□ 1.79
SSSCA1-207ENST00000533115 LRRC37BQ96QE4 947 aa26.21■■□□□ 1.79
SSSCA1-207ENST00000533115 PLK3Q9H4B4 646 aa26.21■■□□□ 1.79
SSSCA1-207ENST00000533115 FBXL3Q9UKT7 428 aa26.21■■□□□ 1.79
SSSCA1-207ENST00000533115 IGHV4-30-2A0A087WSY4 118 aa26.2■■□□□ 1.78
SSSCA1-207ENST00000533115 A0A087WUU8 490 aa26.2■■□□□ 1.78
SSSCA1-207ENST00000533115 GMNNO75496 209 aa26.2■■□□□ 1.78
SSSCA1-207ENST00000533115 F12P00748 615 aaPredicted RBP26.2■■□□□ 1.78
SSSCA1-207ENST00000533115 PATE4P0C8F1 98 aa26.2■■□□□ 1.78
SSSCA1-207ENST00000533115 ZNF84P51523 738 aa26.2■■□□□ 1.78
SSSCA1-207ENST00000533115 TAF11Q15544 211 aa26.2■■□□□ 1.78
SSSCA1-207ENST00000533115 KRT80Q6KB66 452 aa26.2■■□□□ 1.78
SSSCA1-207ENST00000533115 ZNF730Q6ZMV8 503 aa26.2■■□□□ 1.78
SSSCA1-207ENST00000533115 MBOAT2Q6ZWT7 520 aa26.2■■□□□ 1.78
SSSCA1-207ENST00000533115 MEX3DQ86XN8 651 aaKnown RBP26.2■■□□□ 1.78
SSSCA1-207ENST00000533115 ZNF525Q8N782 197 aa26.2■■□□□ 1.78
SSSCA1-207ENST00000533115 SH3GL3Q99963 347 aa26.2■■□□□ 1.78
SSSCA1-207ENST00000533115 DCAF13Q9NV06 445 aaKnown RBP26.2■■□□□ 1.78
SSSCA1-207ENST00000533115 ZNF35P13682 527 aa26.19■■□□□ 1.78
SSSCA1-207ENST00000533115 NPR2P20594 1047 aa26.19■■□□□ 1.78
SSSCA1-207ENST00000533115 NR4A1P22736 598 aa26.19■■□□□ 1.78
SSSCA1-207ENST00000533115 ZNF133P52736 654 aaPredicted RBP26.19■■□□□ 1.78
SSSCA1-207ENST00000533115 SNTB2Q13425 540 aaKnown RBP26.19■■□□□ 1.78
SSSCA1-207ENST00000533115 RAB39AQ14964 217 aa26.19■■□□□ 1.78
SSSCA1-207ENST00000533115 NRN1LQ496H8 165 aa26.19■■□□□ 1.78
SSSCA1-207ENST00000533115 TBPL2Q6SJ96 375 aa26.19■■□□□ 1.78
SSSCA1-207ENST00000533115 CDK20Q8IZL9 346 aa26.19■■□□□ 1.78
SSSCA1-207ENST00000533115 OR4K5Q8NGD3 323 aa26.19■■□□□ 1.78
SSSCA1-207ENST00000533115 ANKRD19PQ9H560 264 aa26.19■■□□□ 1.78
SSSCA1-207ENST00000533115 NMNAT1Q9HAN9 279 aaPredicted RBP26.19■■□□□ 1.78
SSSCA1-207ENST00000533115 ARL8BQ9NVJ2 186 aa26.19■■□□□ 1.78
SSSCA1-207ENST00000533115 TAGLN3Q9UI15 199 aa26.19■■□□□ 1.78
SSSCA1-207ENST00000533115 SAMD4AQ9UPU9 718 aaKnown RBP26.19■■□□□ 1.78
SSSCA1-207ENST00000533115 FN1P02751 2386 aaKnown RBP26.19■■□□□ 1.78
SSSCA1-207ENST00000533115 TRAV27A0A087WT01 109 aa26.18■■□□□ 1.78
SSSCA1-207ENST00000533115 EFCAB9A8MZ26 197 aa26.18■■□□□ 1.78
SSSCA1-207ENST00000533115 DCTN3O75935 186 aa26.18■■□□□ 1.78
SSSCA1-207ENST00000533115 ANKDD1AQ495B1 522 aa26.18■■□□□ 1.78
SSSCA1-207ENST00000533115 C10orf128Q5T292 105 aa26.18■■□□□ 1.78
SSSCA1-207ENST00000533115 DPPA2Q7Z7J5 298 aa26.18■■□□□ 1.78
SSSCA1-207ENST00000533115 OAFQ86UD1 273 aa26.18■■□□□ 1.78
SSSCA1-207ENST00000533115 FAM156AQ8NDB6 213 aa26.18■■□□□ 1.78
SSSCA1-207ENST00000533115 OR51A7Q8NH64 312 aa26.18■■□□□ 1.78
SSSCA1-207ENST00000533115 HDAC2Q92769 488 aaKnown RBP26.18■■□□□ 1.78
SSSCA1-207ENST00000533115 SORCS2Q96PQ0 1159 aa26.18■■□□□ 1.78
SSSCA1-207ENST00000533115 FBXO9Q9UK97 447 aaPredicted RBP26.18■■□□□ 1.78
SSSCA1-207ENST00000533115 SPEF1Q9Y4P9 236 aa26.18■■□□□ 1.78
SSSCA1-207ENST00000533115 HIVEP2P31629 2446 aa26.18■■□□□ 1.78
SSSCA1-207ENST00000533115 NAV3Q8IVL0 2385 aa26.18■■□□□ 1.78
SSSCA1-207ENST00000533115 CR1P17927 2039 aa26.17■■□□□ 1.78
SSSCA1-207ENST00000533115 IGHMP01871 453 aa26.17■■□□□ 1.78
SSSCA1-207ENST00000533115 SLC9A3P48764 834 aa26.17■■□□□ 1.78
SSSCA1-207ENST00000533115 CTXN1P60606 82 aa26.17■■□□□ 1.78
SSSCA1-207ENST00000533115 RPL27P61353 136 aaKnown RBP26.17■■□□□ 1.78
SSSCA1-207ENST00000533115 KRTAP1-1Q07627 177 aa26.17■■□□□ 1.78
SSSCA1-207ENST00000533115 TOP3AQ13472 1001 aaPredicted RBP26.17■■□□□ 1.78
SSSCA1-207ENST00000533115 FHL1Q13642 323 aa26.17■■□□□ 1.78
SSSCA1-207ENST00000533115 ZNF584Q8IVC4 421 aa26.17■■□□□ 1.78
SSSCA1-207ENST00000533115 PGAM4Q8N0Y7 254 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms