RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 CCDC74BQ96LY2 380 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 KCNJ15Q99712 375 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 REG4Q9BYZ8 158 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 GPR61Q9BZJ8 451 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 IL17CQ9P0M4 197 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 LUZP4Q9P127 313 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 IL17BQ9UHF5 180 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 PRSS21Q9Y6M0 314 aa6.25□□□□□ -1.41
TGFBR3-209ENST00000532540 UMAD1C9J7I0 102 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 ICOSLGO75144 302 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 SOCS5O75159 536 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 RPP14O95059 124 aaKnown RBP6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 QDPRP09417 244 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 SLC2A1P11166 492 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 ATP1B2P14415 290 aaPredicted RBP6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 UQCRC2P22695 453 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 NSG1P42857 185 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 ADPRHP54922 357 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 OR10A3P58181 314 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 IHHQ14623 411 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 PLEKHN1Q494U1 663 aaPredicted RBP6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 ZNF626Q68DY1 528 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 FAAP20Q6NZ36 180 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 ZNF322Q6U7Q0 402 aaPredicted RBP6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 RANBP3LQ86VV4 465 aaPredicted RBP6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 PLPP5Q8NEB5 264 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 SLC30A7Q8NEW0 376 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 HUS1BQ8NHY5 278 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 DOK4Q8TEW6 326 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 TFGQ92734 400 aaPredicted RBP6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 TMEM19Q96HH6 336 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 ZNF75AQ96N20 296 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 CLCC1Q96S66 551 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 SLC6A7Q99884 636 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 C1QTNF3Q9BXJ4 246 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 FAM117AQ9C073 453 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 TLNRD1Q9H1K6 362 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 ASIC5Q9NY37 505 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 FBXW2Q9UKT8 454 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 V9GY05 133 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 MEIS3P1A6NDR6 274 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 PRKRAO75569 313 aaKnown RBP6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 GBAP04062 536 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 EPXP11678 715 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 HNRNPA2B1P22626 353 aaKnown RBP6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 TLE4Q04727 773 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 ECH1Q13011 328 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 OR7A5Q15622 319 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 MPPED2Q15777 294 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 MICBQ29980 383 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 ELFN2Q5R3F8 820 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 AWAT2Q6E213 333 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 SEZ6L2Q6UXD5 910 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 LRRTM4Q86VH4 590 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 PTOV1Q86YD1 416 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 VRK3Q8IV63 474 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 MISPQ8IVT2 679 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 BPIFB2Q8N4F0 458 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 ZCCHC10Q8TBK6 192 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 COL26A1Q96A83 441 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 ALG14Q96F25 216 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 OR5B12Q96R08 314 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 NRTNQ99748 197 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 MACROD1Q9BQ69 325 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 FGF20Q9NP95 211 aaPredicted RBP6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 FTSJ1Q9UET6 329 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 HIF3AQ9Y2N7 669 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 CHST2Q9Y4C5 530 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 TDRD6O60522 2096 aaKnown RBP6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 PPM1DO15297 605 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 BCAT2O15382 392 aaPredicted RBP6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 MMP2P08253 660 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 C1SP09871 688 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 SELLP14151 372 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 HTR2CP28335 458 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 TIA1P31483 386 aaKnown RBP eCLIP6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 TAGLN2P37802 199 aaKnown RBP6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 KHKP50053 298 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 TAS2R50P59544 299 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 SPEM2Q0P670 501 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 TOMM34Q15785 309 aaPredicted RBP6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 DEFB110Q30KQ9 67 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 GGNBP1Q5YKI7 109 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 NSUN5P2Q63ZY6 315 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 PXKQ7Z7A4 578 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 SFTPA2Q8IWL1 248 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 HORMAD2Q8N7B1 307 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 L3MBTL4Q8NA19 623 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 RHBDD1Q8TEB9 315 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 GHSRQ92847 366 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 RAB24Q969Q5 203 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 FAM46AQ96IP4 442 aaKnown RBP6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 KIRREL1Q96J84 757 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 C4orf36Q96KX1 117 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 SIGLEC11Q96RL6 698 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 TRIB3Q96RU7 358 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 SPSB2Q99619 263 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 SLC25A18Q9H1K4 315 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 SLC6A13Q9NSD5 602 aa6.24□□□□□ -1.41
TGFBR3-209ENST00000532540 FAM212BQ9NTI7 297 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms