RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 PIGTQ969N2 578 aa8.32□□□□□ -1.08
VPS26B-207ENST00000532160 ZC3HAV1LQ96H79 300 aaKnown RBP8.32□□□□□ -1.08
VPS26B-207ENST00000532160 MOGAT1Q96PD6 335 aa8.32□□□□□ -1.08
VPS26B-207ENST00000532160 PITX2Q99697 317 aa8.32□□□□□ -1.08
VPS26B-207ENST00000532160 MDFIQ99750 246 aa8.32□□□□□ -1.08
VPS26B-207ENST00000532160 PSD2Q9BQI7 771 aa8.32□□□□□ -1.08
VPS26B-207ENST00000532160 ZNF426Q9BUY5 554 aa8.32□□□□□ -1.08
VPS26B-207ENST00000532160 POLR2J2Q9GZM3 115 aaKnown RBP8.32□□□□□ -1.08
VPS26B-207ENST00000532160 RACGAP1Q9H0H5 632 aa8.32□□□□□ -1.08
VPS26B-207ENST00000532160 POLR2J3Q9H1A7 115 aaKnown RBP8.32□□□□□ -1.08
VPS26B-207ENST00000532160 ZNF556Q9HAH1 456 aa8.32□□□□□ -1.08
VPS26B-207ENST00000532160 KRT84Q9NSB2 600 aa8.32□□□□□ -1.08
VPS26B-207ENST00000532160 ZNF226Q9NYT6 803 aa8.32□□□□□ -1.08
VPS26B-207ENST00000532160 WARS2Q9UGM6 360 aaKnown RBP8.32□□□□□ -1.08
VPS26B-207ENST00000532160 NDRG4Q9ULP0 352 aaKnown RBP8.32□□□□□ -1.08
VPS26B-207ENST00000532160 CLEC4AQ9UMR7 237 aa8.32□□□□□ -1.08
VPS26B-207ENST00000532160 SAMHD1Q9Y3Z3 626 aaKnown RBP8.32□□□□□ -1.08
VPS26B-207ENST00000532160 STAB1Q9NY15 2570 aa8.32□□□□□ -1.08
VPS26B-207ENST00000532160 TRAV36DV7A0A075B6V5 113 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 LIPT2A6NK58 231 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 FTCDNL1E5RQL4 147 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 RGS10O43665 173 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 AQP8O94778 261 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 BGLAPP02818 100 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 IFI30P13284 250 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 GRPRP30550 384 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 GPR4P46093 362 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 PCYT1AP49585 367 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 IL5RAQ01344 420 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 KRR1Q13601 381 aaKnown RBP8.31□□□□□ -1.08
VPS26B-207ENST00000532160 GUSBP1Q15486 140 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 NEDD8Q15843 81 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 ZIK1Q3SY52 487 aaPredicted RBP8.31□□□□□ -1.08
VPS26B-207ENST00000532160 PDSS1Q5T2R2 415 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 SYT6Q5T7P8 510 aaPredicted RBP8.31□□□□□ -1.08
VPS26B-207ENST00000532160 ANKRD34AQ69YU3 496 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 FAHD1Q6P587 224 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 PRSS57Q6UWY2 283 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 ZNF730Q6ZMV8 503 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 CCDC103Q8IW40 242 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 HS3ST5Q8IZT8 346 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 KDM8Q8N371 416 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 TMEM99Q8N816 258 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 ZNF610Q8N9Z0 462 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 ATG16L2Q8NAA4 619 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 OR4K5Q8NGD3 323 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 OR9Q2Q8NGE9 314 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 ACOT11Q8WXI4 607 aaPredicted RBP8.31□□□□□ -1.08
VPS26B-207ENST00000532160 ZNF775Q96BV0 537 aaPredicted RBP8.31□□□□□ -1.08
VPS26B-207ENST00000532160 HRASLS5Q96KN8 279 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 DHRS1Q96LJ7 313 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 MBOAT4Q96T53 435 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 TMEM43Q9BTV4 400 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 TAPBPLQ9BX59 468 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 GABARAPL3Q9BY60 117 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 POTEKPQ9BYX7 375 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 PRRG4Q9BZD6 226 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 RNF122Q9H9V4 155 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 KLHL13Q9P2N7 655 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 TMEFF2Q9UIK5 374 aaPredicted RBP8.31□□□□□ -1.08
VPS26B-207ENST00000532160 ENPP5Q9UJA9 477 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 POFUT2Q9Y2G5 429 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 MED31Q9Y3C7 131 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 HDGFL3Q9Y3E1 203 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 MAGED1Q9Y5V3 778 aaPredicted RBP8.31□□□□□ -1.08
VPS26B-207ENST00000532160 LYVE1Q9Y5Y7 322 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 FREM1Q5H8C1 2179 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 ABCA1O95477 2261 aa8.31□□□□□ -1.08
VPS26B-207ENST00000532160 CADP27708 2225 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 A0A1W2PRQ8 180 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 CLDN25C9JDP6 229 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 INAFM1C9JVW0 142 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 C16orf97H3BN30 126 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 M0R082 166 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 M0R3G1 203 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 SMAD9O15198 467 aaKnown RBP8.3□□□□□ -1.08
VPS26B-207ENST00000532160 OR10H3O60404 316 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 GABARAPO95166 117 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 SYNGR4O95473 234 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 PMS2P2O95744 297 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 THBDP07204 575 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 CD8BP10966 210 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 MAKP20794 623 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 GTF2E2P29084 291 aaKnown RBP8.3□□□□□ -1.08
VPS26B-207ENST00000532160 RBM34P42696 430 aaKnown RBP8.3□□□□□ -1.08
VPS26B-207ENST00000532160 LIMS1P48059 325 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 CLK1P49759 484 aaKnown RBP8.3□□□□□ -1.08
VPS26B-207ENST00000532160 MAP2K6P52564 334 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 HMGA2P52926 109 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 RAC3P60763 192 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 CSNK2A1P68400 391 aaPredicted RBP8.3□□□□□ -1.08
VPS26B-207ENST00000532160 SLC35A2P78381 396 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 NPRL3Q12980 569 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 DGCR6Q14129 220 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 ZNF74Q16587 644 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 ZNF239Q16600 458 aaKnown RBP8.3□□□□□ -1.08
VPS26B-207ENST00000532160 TIMM50Q3ZCQ8 353 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 FAM69AQ5T7M9 428 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 XAF1Q6GPH4 301 aa8.3□□□□□ -1.08
VPS26B-207ENST00000532160 C16orf87Q6PH81 154 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms