RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 TMEM19Q96HH6 336 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 OXGR1Q96P68 337 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 ZNF317Q96PQ6 595 aaPredicted RBP7.6□□□□□ -1.19
USF1-210ENST00000531842 SH3GL3Q99963 347 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 GAL3ST1Q99999 423 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 SPATA9Q9BWV2 254 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 ZNF385DQ9H6B1 395 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 HINT3Q9NQE9 182 aaKnown RBP7.6□□□□□ -1.19
USF1-210ENST00000531842 SLAMF8Q9P0V8 285 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 IFT52Q9Y366 437 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 HMGB1P1B2RPK0 211 aaPredicted RBP7.59□□□□□ -1.19
USF1-210ENST00000531842 J3QLI3 93 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 UBDO15205 165 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 LCKP06239 509 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 ANPEPP15144 967 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 CRYBB2P43320 205 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 ARMCX4Q5H9R4 360 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 PAGE3Q5JUK9 113 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 RGS7BPQ6MZT1 257 aaPredicted RBP7.59□□□□□ -1.19
USF1-210ENST00000531842 CGB2Q6NT52 195 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 TMEM154Q6P9G4 183 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 NHLRC1Q6VVB1 395 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 RBMS3Q6XE24 437 aaKnown RBP7.59□□□□□ -1.19
USF1-210ENST00000531842 SPATC1Q76KD6 591 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 RHOUQ7L0Q8 258 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 GEMIN6Q8WXD5 167 aaKnown RBP7.59□□□□□ -1.19
USF1-210ENST00000531842 CCL17Q92583 94 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 GTF2H4Q92759 462 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 TMIGD2Q96BF3 282 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 RAB39BQ96DA2 213 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 THOC1Q96FV9 657 aaKnown RBP7.59□□□□□ -1.19
USF1-210ENST00000531842 DCLRE1CQ96SD1 692 aaKnown RBP7.59□□□□□ -1.19
USF1-210ENST00000531842 PAIP1Q9H074 479 aaKnown RBP7.59□□□□□ -1.19
USF1-210ENST00000531842 NTN4Q9HB63 628 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 NPHS2Q9NP85 383 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 SLC25A37Q9NYZ2 338 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 SELENONQ9NZV5 590 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 ZIM2Q9NZV7 527 aa7.59□□□□□ -1.19
USF1-210ENST00000531842 DSPPQ9NZW4 1301 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 TRBV5-3A0A0A0MS03 114 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 CLDN25C9JDP6 229 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 AIM2O14862 343 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 SPRY3O43610 288 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 AKAP8O43823 692 aaKnown RBP7.58□□□□□ -1.2
USF1-210ENST00000531842 OR2T1O43869 369 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 RAB36O95755 333 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 TSPAN15O95858 294 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 RNASE1P07998 156 aaKnown RBP7.58□□□□□ -1.2
USF1-210ENST00000531842 NUDT7P0C024 238 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 ZCCHC18P0CG32 403 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 NQO1P15559 274 aaKnown RBP7.58□□□□□ -1.2
USF1-210ENST00000531842 HTR2AP28223 471 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 MPV17P39210 176 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 POLR2JP52435 117 aaKnown RBP7.58□□□□□ -1.2
USF1-210ENST00000531842 KLF3P57682 345 aaPredicted RBP7.58□□□□□ -1.2
USF1-210ENST00000531842 MRPS11P82912 194 aaKnown RBP7.58□□□□□ -1.2
USF1-210ENST00000531842 RELBQ01201 579 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 SLC2A7Q6PXP3 512 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 BLOC1S3Q6QNY0 202 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 H1FNTQ75WM6 255 aaPredicted RBP7.58□□□□□ -1.2
USF1-210ENST00000531842 C10orf53Q8N6V4 93 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 PIK3C3Q8NEB9 887 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 IL17RDQ8NFM7 739 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 BBS10Q8TAM1 723 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 SYNPRQ8TBG9 265 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 LRRC8CQ8TDW0 803 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 WFDC12Q8WWY7 111 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 MAL2Q969L2 176 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 MOGAT1Q96PD6 335 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 CCT8L2Q96SF2 557 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 FOXB1Q99853 325 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 WFDC6Q9BQY6 131 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 RAD21L1Q9H4I0 556 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 IKZF5Q9H5V7 419 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 TCF7L2Q9NQB0 619 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 SLC13A4Q9UKG4 626 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 NUP50Q9UKX7 468 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 POFUT2Q9Y2G5 429 aa7.58□□□□□ -1.2
USF1-210ENST00000531842 IGLV3-9A0A075B6K5 115 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 TRAV36DV7A0A075B6V5 113 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 ZSCAN5BA6NJL1 495 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 C11orf98E9PRG8 122 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 CLIC1O00299 241 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 EDF1O60869 148 aaKnown RBP7.57□□□□□ -1.2
USF1-210ENST00000531842 TGDSO95455 350 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 IGHV1-46P01743 117 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 STX1BP61266 288 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 NCALDP61601 193 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 IL13RA1P78552 427 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 RBBP4Q09028 425 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 RGNQ15493 299 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 ALG10BQ5I7T1 473 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 MSANTD1Q6ZTZ1 278 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 NET1Q7Z628 596 aaPredicted RBP7.57□□□□□ -1.2
USF1-210ENST00000531842 KRT73Q86Y46 540 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 UEVLDQ8IX04 471 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 CCDC36Q8IYA8 594 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 SLC30A7Q8NEW0 376 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 ANKK1Q8NFD2 765 aa7.57□□□□□ -1.2
USF1-210ENST00000531842 OR6N1Q8NGY5 312 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms