RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 CRB3Q9BUF7 120 aa12.92□□□□□ -0.34
USP48-213ENST00000529637 TLNRD1Q9H1K6 362 aa12.92□□□□□ -0.34
USP48-213ENST00000529637 TMEM231Q9H6L2 316 aa12.92□□□□□ -0.34
USP48-213ENST00000529637 BIN3Q9NQY0 253 aa12.92□□□□□ -0.34
USP48-213ENST00000529637 DUSP22Q9NRW4 184 aa12.92□□□□□ -0.34
USP48-213ENST00000529637 ASF1BQ9NVP2 202 aa12.92□□□□□ -0.34
USP48-213ENST00000529637 YBX2Q9Y2T7 364 aaKnown RBP12.92□□□□□ -0.34
USP48-213ENST00000529637 C2orf74A8MZ97 194 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 RBBP9O75884 186 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 RPP14O95059 124 aaKnown RBP12.91□□□□□ -0.34
USP48-213ENST00000529637 IFNGP01579 166 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 CD3DP04234 171 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 CBR1P16152 277 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 HNRNPA2B1P22626 353 aaKnown RBP12.91□□□□□ -0.34
USP48-213ENST00000529637 RFC3P40938 356 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 PGDP52209 483 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 ALG11Q2TAA5 492 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 ARMC6Q6NXE6 501 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 NDUFAF7Q7L592 441 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 TAF8Q7Z7C8 310 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 SLC35F2Q8IXU6 374 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 RNF113BQ8IZP6 322 aaKnown RBP12.91□□□□□ -0.34
USP48-213ENST00000529637 EID2Q8N6I1 236 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 OR6K6Q8NGW6 343 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 MIB2Q96AX9 1013 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 MFRPQ9BY79 579 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 TCEAL2Q9H3H9 227 aaPredicted RBP12.91□□□□□ -0.34
USP48-213ENST00000529637 DZANK1Q9NVP4 752 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 NCDNQ9UBB6 729 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 A0A1B0GVT2 93 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 PQLC2LA1A4F0 135 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 C4orf47A7E2U8 309 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 CCSO14618 274 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 SULT1B1O43704 296 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 CTNSO60931 367 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 SNAPC5O75971 98 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 GLSO94925 669 aaPredicted RBP12.91□□□□□ -0.34
USP48-213ENST00000529637 UBBP0CG47 229 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 UBCP0CG48 685 aaKnown RBP12.91□□□□□ -0.34
USP48-213ENST00000529637 NFYBP25208 207 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 TNFRSF4P43489 277 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 NPBWR1P48145 328 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 EMDP50402 254 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 RPS27AP62979 156 aaKnown RBP12.91□□□□□ -0.34
USP48-213ENST00000529637 UBA52P62987 128 aaKnown RBP12.91□□□□□ -0.34
USP48-213ENST00000529637 ERV3-1Q14264 604 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 TMEM71Q6P5X7 295 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 STAC2Q6ZMT1 411 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 Q6ZSR6 202 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 C10orf53Q8N6V4 93 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 EXO5Q9H790 373 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 HAO2Q9NYQ3 351 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 ADAM18Q9Y3Q7 739 aa12.91□□□□□ -0.34
USP48-213ENST00000529637 PRKNO60260 465 aaPredicted RBP12.9□□□□□ -0.34
USP48-213ENST00000529637 ACTL6AO96019 429 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 NGFRP08138 427 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 DGAT2L6Q6ZPD8 337 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 TMED4Q7Z7H5 227 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 DND1Q8IYX4 353 aaKnown RBP12.9□□□□□ -0.34
USP48-213ENST00000529637 C12orf45Q8N5I9 185 aaPredicted RBP12.9□□□□□ -0.34
USP48-213ENST00000529637 GLYATL2Q8WU03 294 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 RNF166Q96A37 237 aaPredicted RBP12.9□□□□□ -0.34
USP48-213ENST00000529637 TM4SF19Q96DZ7 209 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 RBM18Q96H35 190 aaKnown RBP12.9□□□□□ -0.34
USP48-213ENST00000529637 POFUT1Q9H488 388 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 MEX3AA1L020 520 aaKnown RBP12.9□□□□□ -0.34
USP48-213ENST00000529637 H7C417 338 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 OR2T1O43869 369 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 MAS1P04201 325 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 LIPCP11150 499 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 GTF2F2P13984 249 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 CCR4P51679 360 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 FHL1Q13642 323 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 SWI5Q1ZZU3 235 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 TMPRSS12Q86WS5 348 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 METTL27Q8N6F8 245 aaPredicted RBP12.9□□□□□ -0.34
USP48-213ENST00000529637 GATSQ8NAP1 163 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 MRGPRX1Q96LB2 322 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 CNN2Q99439 309 aaKnown RBP12.9□□□□□ -0.34
USP48-213ENST00000529637 VRK1Q99986 396 aaPredicted RBP12.9□□□□□ -0.34
USP48-213ENST00000529637 APMAPQ9HDC9 416 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 MTFP1Q9UDX5 166 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 HCRTR1O43613 425 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 CTSBP07858 339 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 OR2T7P0C7T2 308 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 SLC6A6P31641 620 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 PLAURQ03405 335 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 ODF4Q2M2E3 257 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 PRICKLE4Q2TBC4 344 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 UNQ6126/PRO20091Q6UXV3 157 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 BEST3Q8N1M1 668 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 SVBPQ8N300 66 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 OR2T27Q8NH04 317 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 FLVCR1-AS1Q8TAF5 88 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 THAP6Q8TBB0 222 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 RXFP4Q8TDU9 374 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 Q96M85 177 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 PTDSS2Q9BVG9 487 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 LMAN2LQ9H0V9 348 aa12.9□□□□□ -0.34
USP48-213ENST00000529637 FLRT3Q9NZU0 649 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms