RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 TMEM53Q6P2H8 277 aa9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 SLC22A24Q8N4F4 322 aa9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 ZNF283Q8N7M2 679 aa9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 FNDC5Q8NAU1 212 aa9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 BHLHE22Q8NFJ8 381 aaPredicted RBP9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 OR6N1Q8NGY5 312 aa9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 FGFBP3Q8TAT2 258 aa9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 ZNF417Q8TAU3 575 aa9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 SSMEM1Q8WWF3 244 aa9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 RAB40AQ8WXH6 277 aa9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 TAAR8Q969N4 342 aa9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 ZNF587Q96SQ5 575 aaPredicted RBP9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 GATA5Q9BWX5 397 aaPredicted RBP9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 C16orf95Q9H693 158 aa9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 NANOGQ9H9S0 305 aa9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 C12orf10Q9HB07 376 aa9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 MARCOQ9UEW3 520 aaPredicted RBP9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 GIMAP2Q9UG22 337 aa9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 NUP214P35658 2090 aaPredicted RBP9.76□□□□□ -0.85
AMBRA1-207ENST00000529553 KIR2DS1A0A191URI9 304 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 MGRN1O60291 552 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 MELTFP08582 738 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 ABHD2P08910 425 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 WNT2P09544 360 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 PATE4P0C8F1 98 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 G6PDP11413 515 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 CHI3L1P36222 383 aaPredicted RBP9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 SEC61A1P61619 476 aaKnown RBP9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 SMU1Q2TAY7 513 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 LIN52Q52LA3 116 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 MBNL2Q5VZF2 373 aaKnown RBP9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 ATG16L1Q676U5 607 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 UNQ6126/PRO20091Q6UXV3 157 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 ZNF572Q7Z3I7 529 aaPredicted RBP9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 POU5F2Q8N7G0 328 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 ZSCAN4Q8NAM6 433 aaPredicted RBP9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 OR6S1Q8NH40 331 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 SLC38A4Q969I6 547 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 DACT3Q96B18 629 aaPredicted RBP9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 SLC47A1Q96FL8 570 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 SLC41A3Q96GZ6 507 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 DCLRE1CQ96SD1 692 aaKnown RBP9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 C1orf50Q9BV19 199 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 EMC6Q9BV81 110 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 SLC19A3Q9BZV2 496 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 ARMC7Q9H6L4 198 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 MARCH7Q9H992 704 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 TNFRSF19Q9NS68 423 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 TMEM106BQ9NUM4 274 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 ASIC5Q9NY37 505 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 ZNF232Q9UNY5 417 aa9.75□□□□□ -0.85
AMBRA1-207ENST00000529553 TRAV40A0A0B4J280 105 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 IGHV2-70DA0A0C4DH43 119 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 IQCMA0A1B0GVH7 501 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 ZNF500O60304 480 aaPredicted RBP9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 PIP5K1CO60331 668 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 FARS2O95363 451 aaKnown RBP9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 TGDSO95455 350 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 CPSF4O95639 269 aaKnown RBP9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 NR2F1P10589 423 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 CCL2P13500 99 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 GRPRP30550 384 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 BTG1P62324 171 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 EMX2Q04743 252 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 PLP2Q04941 152 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 NRN1LQ496H8 165 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 ZMAT1Q5H9K5 638 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 RNF220Q5VTB9 566 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 MUC20Q8N307 709 aaPredicted RBP9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 SCAIQ8N9R8 606 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 NOA1Q8NC60 698 aaKnown RBP9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 OR1J1Q8NGS3 322 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 OR52P1PQ8NH57 321 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 MZB1Q8WU39 189 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 SLC35B4Q969S0 331 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 MARS2Q96GW9 593 aaKnown RBP9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 TXNDC15Q96J42 360 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 SAMD8Q96LT4 415 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 C3orf30Q96M34 536 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 FMO2Q99518 471 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 OR51B6Q9H340 312 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 RNF121Q9H920 327 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 NECAP2Q9NVZ3 263 aa9.74□□□□□ -0.85
AMBRA1-207ENST00000529553 TRAV36DV7A0A075B6V5 113 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 A0A087WUJ7 227 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 TMEM233B4DJY2 109 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 H3BSA7 217 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 TNFRSF13BO14836 293 aaPredicted RBP9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 DHHO43323 396 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 TRIM13O60858 407 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 HPRP00739 348 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 PRG2P13727 222 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 HLA-DOBP13765 273 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 TNFRSF1AP19438 455 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 MDH2P40926 338 aaKnown RBP9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 CSNK1A1P48729 337 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 GLO1Q04760 184 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 CASP8Q14790 479 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 LARS2Q15031 903 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms