RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 WWTR1Q9GZV5 400 aa3.92□□□□□ -1.78
CSDE1-212ENST00000529046 AICDAQ9GZX7 198 aa3.92□□□□□ -1.78
CSDE1-212ENST00000529046 HOXD1Q9GZZ0 328 aa3.92□□□□□ -1.78
CSDE1-212ENST00000529046 SPNS1Q9H2V7 528 aa3.92□□□□□ -1.78
CSDE1-212ENST00000529046 RIMS4Q9H426 269 aaPredicted RBP3.92□□□□□ -1.78
CSDE1-212ENST00000529046 COPS7BQ9H9Q2 264 aaPredicted RBP3.92□□□□□ -1.78
CSDE1-212ENST00000529046 IL1RL2Q9HB29 575 aa3.92□□□□□ -1.78
CSDE1-212ENST00000529046 SH2D2AQ9NP31 389 aa3.92□□□□□ -1.78
CSDE1-212ENST00000529046 KCNJ16Q9NPI9 418 aa3.92□□□□□ -1.78
CSDE1-212ENST00000529046 HPF1Q9NWY4 346 aa3.92□□□□□ -1.78
CSDE1-212ENST00000529046 MS4A12Q9NXJ0 267 aa3.92□□□□□ -1.78
CSDE1-212ENST00000529046 LEF1Q9UJU2 399 aaPredicted RBP3.92□□□□□ -1.78
CSDE1-212ENST00000529046 ZNF223Q9UK11 482 aaPredicted RBP3.92□□□□□ -1.78
CSDE1-212ENST00000529046 SNX12Q9UMY4 172 aa3.92□□□□□ -1.78
CSDE1-212ENST00000529046 PPP1R3CQ9UQK1 317 aa3.92□□□□□ -1.78
CSDE1-212ENST00000529046 MYO7BQ6PIF6 2116 aa3.92□□□□□ -1.78
CSDE1-212ENST00000529046 HIVEP1P15822 2718 aa3.92□□□□□ -1.78
CSDE1-212ENST00000529046 ANKRD17O75179 2603 aaKnown RBP3.91□□□□□ -1.78
CSDE1-212ENST00000529046 TRBV11-1A0A0K0K1C0 115 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 CTAGE15A4D2H0 777 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 ZNF860A6NHJ4 632 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 C4orf51C9J302 202 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 PRSS46E5RG02 174 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 EIF3HO15372 352 aaKnown RBP eCLIP3.91□□□□□ -1.78
CSDE1-212ENST00000529046 ZSCAN12O43309 604 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 ERI3O43414 337 aaKnown RBP3.91□□□□□ -1.78
CSDE1-212ENST00000529046 B4GALT2O60909 372 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 STK16O75716 305 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 OR2J2O76002 312 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 MYO1DO94832 1006 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 GUCA1CO95843 209 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 IGKV3-11P04433 115 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 PPP2R1BP30154 601 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 ELK3P41970 407 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 OR3A1P47881 315 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 ZFP36L2P47974 494 aaKnown RBP3.91□□□□□ -1.78
CSDE1-212ENST00000529046 LIM2P55344 173 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 XGP55808 180 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 CLDN17P56750 224 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 RAB8AP61006 207 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 PPIAP62937 165 aaKnown RBP3.91□□□□□ -1.78
CSDE1-212ENST00000529046 TLE4Q04727 773 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 SLC10A1Q14973 349 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 SLMAPQ14BN4 828 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 PPP1R7Q15435 360 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 ZNF791Q3KP31 576 aaPredicted RBP3.91□□□□□ -1.78
CSDE1-212ENST00000529046 SLC25A35Q3KQZ1 300 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 KRT71Q3SY84 523 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 FBXL19-AS1Q494R0 122 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 PIGGQ5H8A4 983 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 PAGE2BQ5JRK9 111 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 TOR1AIP1Q5JTV8 583 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 RIPPLY2Q5TAB7 128 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 SLC22A10Q63ZE4 541 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 HIST2H2AA3Q6FI13 130 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 OR4C11Q6IEV9 310 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 SULT1C3Q6IMI6 304 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 RTL4Q6ZR62 310 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 CTAGE6Q86UF2 777 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 MEX3DQ86XN8 651 aaKnown RBP3.91□□□□□ -1.78
CSDE1-212ENST00000529046 ZNF619Q8N2I2 560 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 GBP7Q8N8V2 638 aaPredicted RBP3.91□□□□□ -1.78
CSDE1-212ENST00000529046 BBOF1Q8ND07 529 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 OR2M7Q8NG81 312 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 OR5T2Q8NGG2 359 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 PAQR8Q8TEZ7 354 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 ZNF721Q8TF20 911 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 UBE2E3Q969T4 207 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 NCLNQ969V3 563 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 LINC00479Q96M42 142 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 RASL10BQ96S79 203 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 SECISBP2Q96T21 854 aaKnown RBP3.91□□□□□ -1.78
CSDE1-212ENST00000529046 FOXC2Q99958 501 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 PELOQ9BRX2 385 aaKnown RBP3.91□□□□□ -1.78
CSDE1-212ENST00000529046 TTYH2Q9BSA4 534 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 RHOJQ9H4E5 214 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 PRTFDC1Q9NRG1 225 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 DEPPQ9NTK1 212 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.91□□□□□ -1.78
CSDE1-212ENST00000529046 CNIH4Q9P003 139 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 B4GALT7Q9UBV7 327 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 ZNF629Q9UEG4 869 aaPredicted RBP3.91□□□□□ -1.78
CSDE1-212ENST00000529046 FETUBQ9UGM5 382 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 SH3BGRL2Q9UJC5 107 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 PTBP2Q9UKA9 531 aaKnown RBP3.91□□□□□ -1.78
CSDE1-212ENST00000529046 FBXW2Q9UKT8 454 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 ZNF490Q9ULM2 529 aaPredicted RBP3.91□□□□□ -1.78
CSDE1-212ENST00000529046 RNF6Q9Y252 685 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 CLCA3PQ9Y6N3 262 aa3.91□□□□□ -1.78
CSDE1-212ENST00000529046 TEP1Q99973 2627 aaKnown RBP3.91□□□□□ -1.78
CSDE1-212ENST00000529046 SVILO95425 2214 aa3.9□□□□□ -1.78
CSDE1-212ENST00000529046 TRAV18A0A075B6X5 111 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 TRBV4-1A0A0J9YWV2 114 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 NKX6-3A6NJ46 265 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 TRIM64CA6NLI5 447 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 CDC7O00311 574 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 TAPBPO15533 448 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 CDH16O75309 829 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 SAP30O75446 220 aa3.9□□□□□ -1.79
CSDE1-212ENST00000529046 CTAG2O75638 210 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms