RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 AKR1C4P17516 323 aa16.39■□□□□ 0.21
LTBP3-210ENST00000528516 SNU13P55769 128 aaKnown RBP16.39■□□□□ 0.21
LTBP3-210ENST00000528516 PDE7AQ13946 482 aa16.39■□□□□ 0.21
LTBP3-210ENST00000528516 DCAF12L2Q5VW00 463 aa16.39■□□□□ 0.21
LTBP3-210ENST00000528516 SEZ6L2Q6UXD5 910 aa16.39■□□□□ 0.21
LTBP3-210ENST00000528516 UNQ6126/PRO20091Q6UXV3 157 aa16.39■□□□□ 0.21
LTBP3-210ENST00000528516 SLC35F2Q8IXU6 374 aa16.39■□□□□ 0.21
LTBP3-210ENST00000528516 APOBEC4Q8WW27 367 aaKnown RBP16.39■□□□□ 0.21
LTBP3-210ENST00000528516 OR52A5Q9H2C5 316 aa16.39■□□□□ 0.21
LTBP3-210ENST00000528516 F3P13726 295 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 RFC3P40938 356 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 FOXK2Q01167 660 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 SGCAQ16586 387 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 ZNF485Q8NCK3 441 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 OR2AJ1Q8NGZ0 328 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 SEC22AQ96IW7 307 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 METTL7AQ9H8H3 244 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 PCDHB10Q9UN67 800 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 SULT1C2O00338 296 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 H2BFSP57053 126 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 PPP2CBP62714 309 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 PPP2CAP67775 309 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 ZNF793Q6ZN11 406 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 ZNF704Q6ZNC4 412 aaPredicted RBP16.38■□□□□ 0.21
LTBP3-210ENST00000528516 FAM83CQ9BQN1 747 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 SGPP1Q9BX95 441 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 C1orf196B1AJZ1 125 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 SLC16A7O60669 478 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 IGHA1P01876 353 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 RBM39Q14498 530 aaKnown RBP16.38■□□□□ 0.21
LTBP3-210ENST00000528516 CORO6Q6QEF8 472 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 PRSS41Q7RTY9 318 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 TMEM151BQ8IW70 566 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 GTPBP8Q8N3Z3 284 aaPredicted RBP16.38■□□□□ 0.21
LTBP3-210ENST00000528516 OR1S2Q8NGQ3 325 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 DVL3Q92997 716 aaPredicted RBP16.38■□□□□ 0.21
LTBP3-210ENST00000528516 PNPLA2Q96AD5 504 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 FBXO17Q96EF6 278 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 ARL5BQ96KC2 179 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 TOX2Q96NM4 488 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 PITHD1Q9GZP4 211 aaPredicted RBP16.38■□□□□ 0.21
LTBP3-210ENST00000528516 SLC38A1Q9H2H9 487 aa16.38■□□□□ 0.21
LTBP3-210ENST00000528516 OTOL1A6NHN0 477 aaPredicted RBP16.37■□□□□ 0.21
LTBP3-210ENST00000528516 NDUFS6O75380 124 aaKnown RBP16.37■□□□□ 0.21
LTBP3-210ENST00000528516 AMY2AP04746 511 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 IFNA4P05014 189 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 SPOCK1Q08629 439 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 FAM109BQ6ICB4 259 aaPredicted RBP16.37■□□□□ 0.21
LTBP3-210ENST00000528516 MFSD12Q6NUT3 480 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 OR6S1Q8NH40 331 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 OR5AK2Q8NH90 309 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 RSC1A1Q92681 617 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 PIGMQ9H3S5 423 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 FBXO34Q9NWN3 711 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 EPHA6Q9UF33 1036 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 MIOXQ9UGB7 285 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 CASP8AP2Q9UKL3 1982 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 MDC1Q14676 2089 aaKnown RBP16.37■□□□□ 0.21
LTBP3-210ENST00000528516 ZNF726A6NNF4 738 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 HMSDA8MTL9 139 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 FGF17O60258 216 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 CYB5AP00167 134 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 S1PR1P21453 382 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 CSF2RBP32927 897 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 NRG3P56975 720 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 RBMS3Q6XE24 437 aaKnown RBP16.37■□□□□ 0.21
LTBP3-210ENST00000528516 SERINC2Q96SA4 455 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 VRK1Q99986 396 aaPredicted RBP16.37■□□□□ 0.21
LTBP3-210ENST00000528516 EXOGQ9Y2C4 368 aaKnown RBP16.37■□□□□ 0.21
LTBP3-210ENST00000528516 GBF1Q92538 1859 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 ACOT7O00154 380 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 AKR7A3O95154 331 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 SNAPINO95295 136 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 CPN1P15169 458 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 ZNF14P17017 642 aaPredicted RBP16.37■□□□□ 0.21
LTBP3-210ENST00000528516 CBFBQ13951 182 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 C2orf68Q2NKX9 166 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 NKAPLQ5M9Q1 402 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 NKAIN2Q5VXU1 208 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 FAM122BQ7Z309 247 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 FAM3CQ92520 227 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 ASB16Q96NS5 453 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 HCAR1Q9BXC0 346 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 ZNF629Q9UEG4 869 aaPredicted RBP16.37■□□□□ 0.21
LTBP3-210ENST00000528516 SLC35A3Q9Y2D2 325 aa16.37■□□□□ 0.21
LTBP3-210ENST00000528516 SLC33A1O00400 549 aaPredicted RBP16.36■□□□□ 0.21
LTBP3-210ENST00000528516 AQP8O94778 261 aa16.36■□□□□ 0.21
LTBP3-210ENST00000528516 REEP5Q00765 189 aa16.36■□□□□ 0.21
LTBP3-210ENST00000528516 ZP2Q05996 745 aa16.36■□□□□ 0.21
LTBP3-210ENST00000528516 RBMS2Q15434 407 aaKnown RBP16.36■□□□□ 0.21
LTBP3-210ENST00000528516 FAM69BQ5VUD6 431 aa16.36■□□□□ 0.21
LTBP3-210ENST00000528516 NIPAL3Q6P499 406 aa16.36■□□□□ 0.21
LTBP3-210ENST00000528516 TMEM71Q6P5X7 295 aa16.36■□□□□ 0.21
LTBP3-210ENST00000528516 ZNF620Q6ZNG0 422 aa16.36■□□□□ 0.21
LTBP3-210ENST00000528516 MAP3K3Q99759 626 aa16.36■□□□□ 0.21
LTBP3-210ENST00000528516 RSPO3Q9BXY4 272 aaPredicted RBP16.36■□□□□ 0.21
LTBP3-210ENST00000528516 TMPRSS13Q9BYE2 586 aa16.36■□□□□ 0.21
LTBP3-210ENST00000528516 NOX4Q9NPH5 578 aa16.36■□□□□ 0.21
LTBP3-210ENST00000528516 TBX21Q9UL17 535 aa16.36■□□□□ 0.21
LTBP3-210ENST00000528516 SNRPGP15A8MWD9 76 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms