RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 ITFG2Q969R8 447 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 TDRD6O60522 2096 aaKnown RBP13.7□□□□□ -0.22
USP47-207ENST00000527733 NINQ8N4C6 2090 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 TPRP12270 2363 aaKnown RBP13.7□□□□□ -0.22
USP47-207ENST00000527733 DOCK6Q96HP0 2047 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 TRAV17A0A0B4J275 112 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 ZNF891A8MT65 544 aaPredicted RBP13.69□□□□□ -0.22
USP47-207ENST00000527733 CLDN15P56746 228 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 CENPOQ9BU64 300 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 NGBQ9NPG2 151 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 PRSS37A4D1T9 235 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 OR6C65A6NJZ3 312 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 ZNF850A8MQ14 1090 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 GABARAPO95166 117 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 UBCP0CG48 685 aaKnown RBP13.69□□□□□ -0.22
USP47-207ENST00000527733 ZNF74Q16587 644 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 LIPNQ5VXI9 398 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 CCBE1Q6UXH8 406 aaPredicted RBP13.69□□□□□ -0.22
USP47-207ENST00000527733 ESPNLQ6ZVH7 1005 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 OR13C9Q8NGT0 318 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 CASTOR1Q8WTX7 329 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 NARS2Q96I59 477 aaKnown RBP13.69□□□□□ -0.22
USP47-207ENST00000527733 C12orf49Q9H741 205 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 NRIP3Q9NQ35 241 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 LINC01387J3KSC0 135 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 IGHV3-9P01782 118 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 BMP4P12644 408 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 MSR1P21757 451 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 ZXDCQ2QGD7 858 aaPredicted RBP13.69□□□□□ -0.22
USP47-207ENST00000527733 SLC22A6Q4U2R8 563 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 YIF1BQ5BJH7 314 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 UBE2UQ5VVX9 321 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 PLCXD3Q63HM9 321 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 VASH1Q7L8A9 365 aaPredicted RBP13.69□□□□□ -0.22
USP47-207ENST00000527733 TMEM99Q8N816 258 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 TMEM74BQ9NUR3 256 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 KCNIP3Q9Y2W7 256 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 TRDV1A0A1B0GX56 115 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 ZC3H12DA2A288 527 aaKnown RBP13.69□□□□□ -0.22
USP47-207ENST00000527733 B4E171 279 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 HRGP04196 525 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 ANXA3P12429 323 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 TSPAN7P41732 249 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 GRB2P62993 217 aaKnown RBP13.69□□□□□ -0.22
USP47-207ENST00000527733 MRPS10P82664 201 aaKnown RBP13.69□□□□□ -0.22
USP47-207ENST00000527733 ZNF611Q8N823 705 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 POGLUT1Q8NBL1 392 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 TMEM52Q8NDY8 209 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 FAM86C1Q9NVL1 165 aa13.69□□□□□ -0.22
USP47-207ENST00000527733 SPAARA0A1B0GVQ0 90 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 CTDSP2O14595 271 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 SERPINA5P05154 406 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 ETV5P41161 510 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 ETV1P50549 477 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 SLC37A1P57057 533 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 MAB21L1Q13394 359 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 LRRC28Q86X40 367 aaPredicted RBP13.68□□□□□ -0.22
USP47-207ENST00000527733 SYNPRQ8TBG9 265 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 CREB3L1Q96BA8 519 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 KTI12Q96EK9 354 aaPredicted RBP13.68□□□□□ -0.22
USP47-207ENST00000527733 ZNF845Q96IR2 970 aaPredicted RBP13.68□□□□□ -0.22
USP47-207ENST00000527733 MMP25Q9NPA2 562 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 PLA2G3Q9NZ20 509 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 OR52A1Q9UKL2 312 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 A0A0X1KG70 313 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 C21orf140B9A014 251 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 EEF1E1-BLOC1S5C9J1V9 151 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 SHC1P29353 583 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 RBMXP38159 391 aaKnown RBP13.68□□□□□ -0.22
USP47-207ENST00000527733 CD83Q01151 205 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 MZT1Q08AG7 82 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 ISXQ2M1V0 245 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 SERPINA12Q8IW75 414 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 MKXQ8IYA7 352 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 OR6Q1Q8NGQ2 317 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 PPP1R14BQ96C90 147 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 GNRHR2Q96P88 292 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 TSSK2Q96PF2 358 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 SORCS2Q96PQ0 1159 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 WDR54Q9H977 334 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 MRPL15Q9P015 296 aaKnown RBP13.68□□□□□ -0.22
USP47-207ENST00000527733 GPR160Q9UJ42 338 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 GREB1Q4ZG55 1949 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 PRRG2O14669 202 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 PRICKLE3O43900 615 aaPredicted RBP13.68□□□□□ -0.22
USP47-207ENST00000527733 DIRAS3O95661 229 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 GP1BAP07359 652 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 SMIM18P0DKX4 95 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 MTNR1BP49286 362 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 MOB3CQ70IA8 216 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 SLC6A7Q99884 636 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 PAPOLGQ9BWT3 736 aaKnown RBP13.68□□□□□ -0.22
USP47-207ENST00000527733 TSPAN10Q9H1Z9 355 aaPredicted RBP13.68□□□□□ -0.22
USP47-207ENST00000527733 TBC1D24Q9ULP9 559 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 SIGLEC7Q9Y286 467 aa13.68□□□□□ -0.22
USP47-207ENST00000527733 DNAJB6O75190 326 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 TNFSF8P32971 234 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 OR2V1Q8NHB1 315 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 M1APQ8TC57 530 aa13.67□□□□□ -0.22
USP47-207ENST00000527733 PTPMT1Q8WUK0 201 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms