RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 NDUFAF4Q9P032 175 aa22.89■■□□□ 1.25
TSPAN4-217ENST00000527644 EFCAB9A8MZ26 197 aa22.88■■□□□ 1.25
TSPAN4-217ENST00000527644 TRMUO75648 421 aaKnown RBP22.88■■□□□ 1.25
TSPAN4-217ENST00000527644 RHCEP18577 417 aa22.88■■□□□ 1.25
TSPAN4-217ENST00000527644 SLC9A3P48764 834 aa22.88■■□□□ 1.25
TSPAN4-217ENST00000527644 RIPPLY3P57055 190 aa22.88■■□□□ 1.25
TSPAN4-217ENST00000527644 CLEC12BQ2HXU8 276 aa22.88■■□□□ 1.25
TSPAN4-217ENST00000527644 TBPL2Q6SJ96 375 aa22.88■■□□□ 1.25
TSPAN4-217ENST00000527644 MYPOPQ86VE0 399 aaPredicted RBP22.88■■□□□ 1.25
TSPAN4-217ENST00000527644 DEFB107AQ8IZN7 70 aa22.88■■□□□ 1.25
TSPAN4-217ENST00000527644 CIARTQ8N365 385 aaPredicted RBP22.88■■□□□ 1.25
TSPAN4-217ENST00000527644 NOXO1Q8NFA2 376 aa22.88■■□□□ 1.25
TSPAN4-217ENST00000527644 MCHR2Q969V1 340 aa22.88■■□□□ 1.25
TSPAN4-217ENST00000527644 ZNF347Q96SE7 839 aa22.88■■□□□ 1.25
TSPAN4-217ENST00000527644 TMEM38BQ9NVV0 291 aa22.88■■□□□ 1.25
TSPAN4-217ENST00000527644 ZNF224Q9NZL3 707 aa22.88■■□□□ 1.25
TSPAN4-217ENST00000527644 GDF2Q9UK05 429 aaPredicted RBP22.88■■□□□ 1.25
TSPAN4-217ENST00000527644 A0A1W2PRQ8 180 aa22.87■■□□□ 1.25
TSPAN4-217ENST00000527644 NDUFS7O75251 213 aa22.87■■□□□ 1.25
TSPAN4-217ENST00000527644 UBL3O95164 117 aa22.87■■□□□ 1.25
TSPAN4-217ENST00000527644 H1F0P07305 194 aaKnown RBP22.87■■□□□ 1.25
TSPAN4-217ENST00000527644 OR8G3PP0DMU2 310 aa22.87■■□□□ 1.25
TSPAN4-217ENST00000527644 PIGFQ07326 219 aa22.87■■□□□ 1.25
TSPAN4-217ENST00000527644 DGCR6Q14129 220 aa22.87■■□□□ 1.25
TSPAN4-217ENST00000527644 OAFQ86UD1 273 aa22.87■■□□□ 1.25
TSPAN4-217ENST00000527644 SKA3Q8IX90 412 aa22.87■■□□□ 1.25
TSPAN4-217ENST00000527644 SLC22A24Q8N4F4 322 aa22.87■■□□□ 1.25
TSPAN4-217ENST00000527644 FAM86B1Q8N7N1 296 aa22.87■■□□□ 1.25
TSPAN4-217ENST00000527644 SYT14Q8NB59 555 aa22.87■■□□□ 1.25
TSPAN4-217ENST00000527644 NUP37Q8NFH4 326 aa22.87■■□□□ 1.25
TSPAN4-217ENST00000527644 ZNF75AQ96N20 296 aa22.87■■□□□ 1.25
TSPAN4-217ENST00000527644 PMF1-BGLAPU3KQ54 211 aa22.87■■□□□ 1.25
TSPAN4-217ENST00000527644 C2CD3Q4AC94 2353 aa22.87■■□□□ 1.25
TSPAN4-217ENST00000527644 IGHV2OR16-5A0A0B4J2B6 119 aa22.86■■□□□ 1.25
TSPAN4-217ENST00000527644 FAM171A2A8MVW0 826 aa22.86■■□□□ 1.25
TSPAN4-217ENST00000527644 H7C417 338 aa22.86■■□□□ 1.25
TSPAN4-217ENST00000527644 FARS2O95363 451 aaKnown RBP22.86■■□□□ 1.25
TSPAN4-217ENST00000527644 ZNF84P51523 738 aa22.86■■□□□ 1.25
TSPAN4-217ENST00000527644 ZNF133P52736 654 aaPredicted RBP22.86■■□□□ 1.25
TSPAN4-217ENST00000527644 RAB1AP62820 205 aa22.86■■□□□ 1.25
TSPAN4-217ENST00000527644 RAB35Q15286 201 aa22.86■■□□□ 1.25
TSPAN4-217ENST00000527644 NRN1LQ496H8 165 aa22.86■■□□□ 1.25
TSPAN4-217ENST00000527644 TMPRSS11FQ6ZWK6 438 aa22.86■■□□□ 1.25
TSPAN4-217ENST00000527644 MEX3DQ86XN8 651 aaKnown RBP22.86■■□□□ 1.25
TSPAN4-217ENST00000527644 CCDC197Q8NCU1 140 aa22.86■■□□□ 1.25
TSPAN4-217ENST00000527644 OR51A7Q8NH64 312 aa22.86■■□□□ 1.25
TSPAN4-217ENST00000527644 SLC7A13Q8TCU3 470 aa22.86■■□□□ 1.25
TSPAN4-217ENST00000527644 PYURFQ96I23 114 aa22.86■■□□□ 1.25
TSPAN4-217ENST00000527644 TNFRSF13CQ96RJ3 184 aa22.86■■□□□ 1.25
TSPAN4-217ENST00000527644 NOX3Q9HBY0 568 aa22.86■■□□□ 1.25
TSPAN4-217ENST00000527644 FBXL3Q9UKT7 428 aa22.86■■□□□ 1.25
TSPAN4-217ENST00000527644 TRAV27A0A087WT01 109 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 PDE5AO76074 875 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 RAB36O95755 333 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 IGHMP01871 453 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 ZNF14P17017 642 aaPredicted RBP22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 ITGA2P17301 1181 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 MSX2P35548 267 aaPredicted RBP22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 ACVR1BP36896 505 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 SERPINF1P36955 418 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 PTDSS1P48651 473 aaKnown RBP22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 CTXN1P60606 82 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 RPL27P61353 136 aaKnown RBP22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 VLDLRP98155 873 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 MYBPC1Q00872 1141 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 HGFACQ04756 655 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 TNK1Q13470 666 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 FHL1Q13642 323 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 SWI5Q1ZZU3 235 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 MST1LQ2TV78 715 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 PODNL1Q6PEZ8 512 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 LRRC75AQ8NAA5 344 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 FBXO17Q96EF6 278 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 NSL1Q96IY1 281 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 NSMCE2Q96MF7 247 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 SMR3AQ99954 134 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 TMEM5Q9Y2B1 443 aa22.85■■□□□ 1.25
TSPAN4-217ENST00000527644 ZFHX3Q15911 3703 aa22.84■■□□□ 1.25
TSPAN4-217ENST00000527644 VSTM5A8MXK1 200 aa22.84■■□□□ 1.25
TSPAN4-217ENST00000527644 hCG_2039718K7EN88 272 aa22.84■■□□□ 1.25
TSPAN4-217ENST00000527644 ARPC2O15144 300 aa22.84■■□□□ 1.25
TSPAN4-217ENST00000527644 NR2C1P13056 603 aa22.84■■□□□ 1.25
TSPAN4-217ENST00000527644 GIPRP48546 466 aa22.84■■□□□ 1.25
TSPAN4-217ENST00000527644 C10orf128Q5T292 105 aa22.84■■□□□ 1.25
TSPAN4-217ENST00000527644 FAM205BPQ63HN1 556 aa22.84■■□□□ 1.25
TSPAN4-217ENST00000527644 DPPA2Q7Z7J5 298 aa22.84■■□□□ 1.25
TSPAN4-217ENST00000527644 HDAC2Q92769 488 aaKnown RBP22.84■■□□□ 1.25
TSPAN4-217ENST00000527644 ZNF442Q9H7R0 627 aa22.84■■□□□ 1.25
TSPAN4-217ENST00000527644 SMURF2Q9HAU4 748 aa22.84■■□□□ 1.25
TSPAN4-217ENST00000527644 ZNF346Q9UL40 294 aaKnown RBP22.84■■□□□ 1.25
TSPAN4-217ENST00000527644 B2RBV5 119 aa22.83■■□□□ 1.25
TSPAN4-217ENST00000527644 SMAD7O15105 426 aaKnown RBP22.83■■□□□ 1.25
TSPAN4-217ENST00000527644 MGRN1O60291 552 aa22.83■■□□□ 1.25
TSPAN4-217ENST00000527644 SEMG1P04279 462 aa22.83■■□□□ 1.25
TSPAN4-217ENST00000527644 OR4A8P0C604 315 aa22.83■■□□□ 1.25
TSPAN4-217ENST00000527644 GPR4P46093 362 aa22.83■■□□□ 1.25
TSPAN4-217ENST00000527644 TOP3AQ13472 1001 aaPredicted RBP22.83■■□□□ 1.25
TSPAN4-217ENST00000527644 ADIPOQQ15848 244 aa22.83■■□□□ 1.25
TSPAN4-217ENST00000527644 FGD3Q5JSP0 725 aa22.83■■□□□ 1.25
TSPAN4-217ENST00000527644 VHLLQ6RSH7 139 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms