RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 AQP2P41181 271 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 CDKN2AP42771 156 aaKnown RBP11.37□□□□□ -0.59
CAPN1-208ENST00000527323 GRK6P43250 576 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 ENPP2Q13822 863 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 FAM53BQ14153 422 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 HYAL4Q2M3T9 481 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 SLC6A19Q695T7 634 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 LRRN1Q6UXK5 716 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 Q6ZSR6 202 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 KRT77Q7Z794 578 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 OR51D1Q8NGF3 324 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 ULBP3Q9BZM4 244 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 LYRM4Q9HD34 91 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 MED9Q9NWA0 146 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 FRRS1LQ9P0K9 344 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 GPR160Q9UJ42 338 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 ZNF337Q9Y3M9 751 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 ETV7Q9Y603 341 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 ALPK2Q86TB3 2170 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 ARID1BQ8NFD5 2236 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-208ENST00000527323 D6RAR5 112 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 H0YC42 278 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 H7C417 338 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 SMAD9O15198 467 aaKnown RBP11.37□□□□□ -0.59
CAPN1-208ENST00000527323 PLRG1O43660 514 aaKnown RBP11.37□□□□□ -0.59
CAPN1-208ENST00000527323 NKX2-2O95096 273 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 IGF2P01344 180 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 IGKV1D-16P01601 117 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 RPS27P42677 84 aaKnown RBP11.37□□□□□ -0.59
CAPN1-208ENST00000527323 DEFA5Q01523 94 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 MGAT2Q10469 447 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 KCNAB1Q14722 419 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 KIR2DS3Q14952 304 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 SLC36A1Q7Z2H8 476 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 DUSP19Q8WTR2 217 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 DMRTA2Q96SC8 542 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 ZFYVE21Q9BQ24 234 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 POLE3Q9NRF9 147 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 MTFP1Q9UDX5 166 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 MMP17Q9ULZ9 603 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 GTF2A1LQ9UNN4 478 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 MUC22E2RYF6 1773 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-208ENST00000527323 TRAV8-7A0A075B6U6 113 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 XRCC3O43542 346 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 CBX7O95931 251 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 CSF1P09603 554 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 ICAM2P13598 275 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 CCR4P51679 360 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 ARHGDIBP52566 201 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 PSG6Q00889 435 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 FCRL6Q6DN72 434 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 NAXDQ8IW45 347 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 CDH26Q8IXH8 852 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 GATSQ8NAP1 163 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 TMEM106AQ96A25 262 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-208ENST00000527323 CHST6Q9GZX3 395 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 COMMD4Q9H0A8 199 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 TAS2R8Q9NYW2 309 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 ACTR10Q9NZ32 417 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 LAMP5Q9UJQ1 280 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 KLHDC2Q9Y2U9 406 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 OR10H1Q9Y4A9 318 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 HRH3Q9Y5N1 445 aa11.37□□□□□ -0.59
CAPN1-208ENST00000527323 CFAP47Q6ZTR5 3102 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 LOC400499M0QZD8 3231 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 H7C1C5 153 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 CYR61O00622 381 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 SIGLEC5O15389 551 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 FGF2P09038 288 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 PRKACAP17612 351 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 CTXN1P60606 82 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 LCN6P62502 163 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 MAT1AQ00266 395 aaKnown RBP11.36□□□□□ -0.59
CAPN1-208ENST00000527323 SIGLEC14Q08ET2 396 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 IL10RAQ13651 578 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 COL19A1Q14993 1142 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 ZNF660Q6AZW8 331 aaPredicted RBP11.36□□□□□ -0.59
CAPN1-208ENST00000527323 TFAP2EQ6VUC0 442 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 C17orf107Q6ZR85 190 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 TMED4Q7Z7H5 227 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 OR6N2Q8NGY6 317 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 NARS2Q96I59 477 aaKnown RBP11.36□□□□□ -0.59
CAPN1-208ENST00000527323 CCDC3Q9BQI4 270 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 UTP23Q9BRU9 249 aaKnown RBP11.36□□□□□ -0.59
CAPN1-208ENST00000527323 LDAHQ9H6V9 325 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 IFT46Q9NQC8 304 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 MRM2Q9UI43 246 aaKnown RBP11.36□□□□□ -0.59
CAPN1-208ENST00000527323 ARPC3O15145 178 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 F13BP05160 661 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 STARP49675 285 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 CSRP2Q16527 193 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 SLC16A9Q7RTY1 509 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 OR5M9Q8NGP3 310 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 OR10AC1Q8NH08 325 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 OR1S1Q8NH92 325 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 RBM18Q96H35 190 aaKnown RBP11.36□□□□□ -0.59
CAPN1-208ENST00000527323 LRIT1Q9P2V4 623 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 STEAP1Q9UHE8 339 aa11.36□□□□□ -0.59
CAPN1-208ENST00000527323 PILRAQ9UKJ1 303 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms