RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 ATP6V1B2P21281 511 aa16.62■□□□□ 0.25
PKP3-204ENST00000526971 TRIM25Q14258 630 aaKnown RBP16.62■□□□□ 0.25
PKP3-204ENST00000526971 PGGHGQ32M88 737 aa16.62■□□□□ 0.25
PKP3-204ENST00000526971 ANKDD1AQ495B1 522 aa16.62■□□□□ 0.25
PKP3-204ENST00000526971 ALG10Q5BKT4 473 aa16.62■□□□□ 0.25
PKP3-204ENST00000526971 FGD3Q5JSP0 725 aa16.62■□□□□ 0.25
PKP3-204ENST00000526971 CYP2R1Q6VVX0 501 aa16.62■□□□□ 0.25
PKP3-204ENST00000526971 ZNF627Q7L945 461 aa16.62■□□□□ 0.25
PKP3-204ENST00000526971 OAFQ86UD1 273 aa16.62■□□□□ 0.25
PKP3-204ENST00000526971 PHC2Q8IXK0 858 aa16.62■□□□□ 0.25
PKP3-204ENST00000526971 ASB10Q8WXI3 467 aa16.62■□□□□ 0.25
PKP3-204ENST00000526971 NANOS1Q8WY41 292 aaKnown RBP16.62■□□□□ 0.25
PKP3-204ENST00000526971 IL1RAPQ9NPH3 570 aa16.62■□□□□ 0.25
PKP3-204ENST00000526971 POFUT2Q9Y2G5 429 aa16.62■□□□□ 0.25
PKP3-204ENST00000526971 TRBV4-1A0A0J9YWV2 114 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 NPIPB13A6NJU9 1138 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 NPIPB4C9JG80 1138 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 MCIDASD6RGH6 385 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 IGHG1P01857 330 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 FABP3P05413 133 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 SLC9A3P48764 834 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 SMIM11AP58511 58 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 MS4A2Q01362 244 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 RUNX1T1Q06455 604 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 FHL1Q13642 323 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 MTX3Q5HYI7 312 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 ARMC4Q5T2S8 1044 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 LCN8Q6JVE9 175 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 LRFN4Q6PJG9 635 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 HDDC2Q7Z4H3 204 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 DHFR2Q86XF0 187 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 CCDC36Q8IYA8 594 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 PIAS4Q8N2W9 510 aaPredicted RBP16.61■□□□□ 0.25
PKP3-204ENST00000526971 OR52J3Q8NH60 311 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 OR51A7Q8NH64 312 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 SMAP2Q8WU79 429 aaPredicted RBP16.61■□□□□ 0.25
PKP3-204ENST00000526971 TNFRSF13CQ96RJ3 184 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 SEPHS2Q99611 448 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 FUZQ9BT04 418 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 MRPL13Q9BYD1 178 aaKnown RBP16.61■□□□□ 0.25
PKP3-204ENST00000526971 MOV10Q9HCE1 1003 aaKnown RBP16.61■□□□□ 0.25
PKP3-204ENST00000526971 TMEM5Q9Y2B1 443 aa16.61■□□□□ 0.25
PKP3-204ENST00000526971 TRAV27A0A087WT01 109 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 TCRBV5S2A0A599 114 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 RNF212BA8MTL3 300 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 CENPBD1B2RD01 187 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 CDC42EP2O14613 210 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 CD5LO43866 347 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 SEC14L2O76054 403 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 GPR4P46093 362 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 TUBA1BP68363 451 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 TUBA4AP68366 448 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 SPOCK1Q08629 439 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 SEC23BQ15437 767 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 TAF11Q15544 211 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 ETFDHQ16134 617 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 HIST3H3Q16695 136 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 SLC22A25Q6T423 547 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 TUBA1AQ71U36 451 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 PIWIL3Q7Z3Z3 882 aaKnown RBP16.6■□□□□ 0.25
PKP3-204ENST00000526971 FAM169BQ8N8A8 192 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 LRRC75AQ8NAA5 344 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 OR13C2Q8NGS9 318 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 TRMT61AQ96FX7 289 aaKnown RBP16.6■□□□□ 0.25
PKP3-204ENST00000526971 CLPTM1LQ96KA5 538 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 ZNF347Q96SE7 839 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 TXNIPQ9H3M7 391 aa16.6■□□□□ 0.25
PKP3-204ENST00000526971 CISD1Q9NZ45 108 aaKnown RBP16.6■□□□□ 0.25
PKP3-204ENST00000526971 STX18Q9P2W9 335 aaKnown RBP16.6■□□□□ 0.25
PKP3-204ENST00000526971 CRNNQ9UBG3 495 aaPredicted RBP16.6■□□□□ 0.25
PKP3-204ENST00000526971 GDF2Q9UK05 429 aaPredicted RBP16.6■□□□□ 0.25
PKP3-204ENST00000526971 TRMUO75648 421 aaKnown RBP16.59■□□□□ 0.25
PKP3-204ENST00000526971 GADD45GO95257 159 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 CD8AP01732 235 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 QDPRP09417 244 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 CBR1P16152 277 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 ACADSP16219 412 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 OMPP47874 163 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 CDH11P55287 796 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 CLRN1P58418 232 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 SPIBQ01892 262 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 C3orf36Q3SXR2 165 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 ZNF813Q6ZN06 617 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 ZDHHC21Q8IVQ6 265 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 DEPDC4Q8N2C3 294 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 NOXO1Q8NFA2 376 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 OR4K5Q8NGD3 323 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 GTPBP3Q969Y2 492 aaKnown RBP16.59■□□□□ 0.25
PKP3-204ENST00000526971 FAM46AQ96IP4 442 aaKnown RBP16.59■□□□□ 0.25
PKP3-204ENST00000526971 SLC38A2Q96QD8 506 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 FOXB1Q99853 325 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 THTPAQ9BU02 230 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 YAE1D1Q9NRH1 226 aa16.59■□□□□ 0.25
PKP3-204ENST00000526971 IGHV1-18A0A0C4DH31 117 aa16.58■□□□□ 0.24
PKP3-204ENST00000526971 SH3PXD2BA1X283 911 aa16.58■□□□□ 0.24
PKP3-204ENST00000526971 ZNF503-AS2A6NEH8 195 aa16.58■□□□□ 0.24
PKP3-204ENST00000526971 GYG2O15488 501 aa16.58■□□□□ 0.24
PKP3-204ENST00000526971 DHHO43323 396 aa16.58■□□□□ 0.24
PKP3-204ENST00000526971 IGLV1-44P01699 117 aa16.58■□□□□ 0.24
PKP3-204ENST00000526971 IGHMP01871 453 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms