RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 SLC22A24Q8N4F4 322 aa17.88■□□□□ 0.45
VPS28-206ENST00000526734 FBXO17Q96EF6 278 aa17.88■□□□□ 0.45
VPS28-206ENST00000526734 REG4Q9BYZ8 158 aa17.88■□□□□ 0.45
VPS28-206ENST00000526734 NDEL1Q9GZM8 345 aa17.88■□□□□ 0.45
VPS28-206ENST00000526734 TXNIPQ9H3M7 391 aa17.88■□□□□ 0.45
VPS28-206ENST00000526734 C1orf198Q9H425 327 aa17.88■□□□□ 0.45
VPS28-206ENST00000526734 SEC61A2Q9H9S3 476 aa17.88■□□□□ 0.45
VPS28-206ENST00000526734 TAGLN3Q9UI15 199 aa17.88■□□□□ 0.45
VPS28-206ENST00000526734 TMEM5Q9Y2B1 443 aa17.88■□□□□ 0.45
VPS28-206ENST00000526734 FAM32AQ9Y421 112 aaKnown RBP17.88■□□□□ 0.45
VPS28-206ENST00000526734 FFAR1O14842 300 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 PIP5K1CO60331 668 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 PRSS23O95084 383 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 IGHMP01871 453 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 OR4A8P0C604 315 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 HSD17B1P14061 328 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 ZNF14P17017 642 aaPredicted RBP17.87■□□□□ 0.45
VPS28-206ENST00000526734 YAP1P46937 504 aaKnown RBP17.87■□□□□ 0.45
VPS28-206ENST00000526734 RAB1AP62820 205 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 HGFACQ04756 655 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 MST1LQ2TV78 715 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 KRTAP21-3Q3LHN1 58 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 SPATS1Q496A3 300 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 SAMD4BQ5PRF9 694 aaKnown RBP17.87■□□□□ 0.45
VPS28-206ENST00000526734 C10orf128Q5T292 105 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 ARMC4Q5T2S8 1044 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 ZNF730Q6ZMV8 503 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 MBOAT2Q6ZWT7 520 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 RRM2BQ7LG56 351 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 NRMQ8IXM6 262 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 ANKS4BQ8N8V4 417 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 FAM156AQ8NDB6 213 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 MOSPD2Q8NHP6 518 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 MCHR2Q969V1 340 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 ALG12Q9BV10 488 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 PLK3Q9H4B4 646 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 GORASP2Q9H8Y8 452 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 NOX3Q9HBY0 568 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 DCAF13Q9NV06 445 aaKnown RBP17.87■□□□□ 0.45
VPS28-206ENST00000526734 MAGEL2Q9UJ55 1249 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 SNX13Q9Y5W8 968 aa17.87■□□□□ 0.45
VPS28-206ENST00000526734 HEATR1Q9H583 2144 aaKnown RBP17.87■□□□□ 0.45
VPS28-206ENST00000526734 EFCAB9A8MZ26 197 aa17.86■□□□□ 0.45
VPS28-206ENST00000526734 J3KTA2 159 aa17.86■□□□□ 0.45
VPS28-206ENST00000526734 TRMUO75648 421 aaKnown RBP17.86■□□□□ 0.45
VPS28-206ENST00000526734 NCK1P16333 377 aa17.86■□□□□ 0.45
VPS28-206ENST00000526734 NPR2P20594 1047 aa17.86■□□□□ 0.45
VPS28-206ENST00000526734 GIPRP48546 466 aa17.86■□□□□ 0.45
VPS28-206ENST00000526734 PTDSS1P48651 473 aaKnown RBP17.86■□□□□ 0.45
VPS28-206ENST00000526734 PPOXP50336 477 aa17.86■□□□□ 0.45
VPS28-206ENST00000526734 MNAT1P51948 309 aa17.86■□□□□ 0.45
VPS28-206ENST00000526734 RPS23P62266 143 aaKnown RBP17.86■□□□□ 0.45
VPS28-206ENST00000526734 DAG1Q14118 895 aa17.86■□□□□ 0.45
VPS28-206ENST00000526734 FXNQ16595 210 aa17.86■□□□□ 0.45
VPS28-206ENST00000526734 SLC36A2Q495M3 483 aa17.86■□□□□ 0.45
VPS28-206ENST00000526734 OAFQ86UD1 273 aa17.86■□□□□ 0.45
VPS28-206ENST00000526734 MYPOPQ86VE0 399 aaPredicted RBP17.86■□□□□ 0.45
VPS28-206ENST00000526734 POM121Q96HA1 1249 aa17.86■□□□□ 0.45
VPS28-206ENST00000526734 ZNF75AQ96N20 296 aa17.86■□□□□ 0.45
VPS28-206ENST00000526734 MYOZ1Q9NP98 299 aaPredicted RBP17.86■□□□□ 0.45
VPS28-206ENST00000526734 ZNF224Q9NZL3 707 aa17.86■□□□□ 0.45
VPS28-206ENST00000526734 RHCGQ9UBD6 479 aa17.86■□□□□ 0.45
VPS28-206ENST00000526734 EGFL7Q9UHF1 273 aa17.86■□□□□ 0.45
VPS28-206ENST00000526734 NF1P21359 2839 aa17.86■□□□□ 0.45
VPS28-206ENST00000526734 A0A087WUU8 490 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 A0A1W2PRQ8 180 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 A6NIZ1 184 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 RNF223E7ERA6 249 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 DYNC1I1O14576 645 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 F12P00748 615 aaPredicted RBP17.85■□□□□ 0.45
VPS28-206ENST00000526734 PTHP01270 115 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 SERPINA5P05154 406 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 ERCC1P07992 297 aaPredicted RBP17.85■□□□□ 0.45
VPS28-206ENST00000526734 SLC25A16P16260 332 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 ITGA2P17301 1181 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 RHCEP18577 417 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 NR4A1P22736 598 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 GYS2P54840 703 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 RAP1BP61224 184 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 RPL27P61353 136 aaKnown RBP17.85■□□□□ 0.45
VPS28-206ENST00000526734 RAP1AP62834 184 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 PIGFQ07326 219 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 SNTB2Q13425 540 aaKnown RBP17.85■□□□□ 0.45
VPS28-206ENST00000526734 DGCR6Q14129 220 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 TMEM53Q6P2H8 277 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 VHLLQ6RSH7 139 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 C16orf89Q6UX73 402 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 TMPRSS11FQ6ZWK6 438 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 SKA3Q8IX90 412 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 OR10H5Q8NGA6 315 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 ZNF347Q96SE7 839 aa17.85■□□□□ 0.45
VPS28-206ENST00000526734 NMNAT1Q9HAN9 279 aaPredicted RBP17.85■□□□□ 0.45
VPS28-206ENST00000526734 KRCC1Q9NPI7 259 aaPredicted RBP17.85■□□□□ 0.45
VPS28-206ENST00000526734 ALPK2Q86TB3 2170 aa17.84■□□□□ 0.45
VPS28-206ENST00000526734 H1F0P07305 194 aaKnown RBP17.84■□□□□ 0.45
VPS28-206ENST00000526734 ZNF35P13682 527 aa17.84■□□□□ 0.45
VPS28-206ENST00000526734 MAKP20794 623 aa17.84■□□□□ 0.45
VPS28-206ENST00000526734 THBS4P35443 961 aa17.84■□□□□ 0.45
VPS28-206ENST00000526734 MRPS34P82930 218 aaKnown RBP17.84■□□□□ 0.45
VPS28-206ENST00000526734 GALK2Q01415 458 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms