RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 SMAP2Q8WU79 429 aaPredicted RBP12.77□□□□□ -0.37
COLCA2-202ENST00000526216 IPCEF1Q8WWN9 437 aaPredicted RBP12.77□□□□□ -0.37
COLCA2-202ENST00000526216 RFKQ969G6 155 aa12.77□□□□□ -0.37
COLCA2-202ENST00000526216 TMEM54Q969K7 222 aa12.77□□□□□ -0.37
COLCA2-202ENST00000526216 TMEM45BQ96B21 275 aa12.77□□□□□ -0.37
COLCA2-202ENST00000526216 ADAD1Q96M93 576 aaKnown RBP12.77□□□□□ -0.37
COLCA2-202ENST00000526216 FOXN4Q96NZ1 517 aa12.77□□□□□ -0.37
COLCA2-202ENST00000526216 BCO1Q9HAY6 547 aa12.77□□□□□ -0.37
COLCA2-202ENST00000526216 ADGRL4Q9HBW9 690 aa12.77□□□□□ -0.37
COLCA2-202ENST00000526216 FGF20Q9NP95 211 aaPredicted RBP12.77□□□□□ -0.37
COLCA2-202ENST00000526216 WARS2Q9UGM6 360 aaKnown RBP12.77□□□□□ -0.37
COLCA2-202ENST00000526216 FOXD3Q9UJU5 478 aaPredicted RBP12.77□□□□□ -0.37
COLCA2-202ENST00000526216 BLOC1S6Q9UL45 172 aa12.77□□□□□ -0.37
COLCA2-202ENST00000526216 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.77□□□□□ -0.37
COLCA2-202ENST00000526216 FKBP7Q9Y680 259 aa12.77□□□□□ -0.37
COLCA2-202ENST00000526216 SLC22A20A6NK97 555 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 SLC22A31A6NKX4 558 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 RGS10O43665 173 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 SLC16A7O60669 478 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 IGHG1P01857 330 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 TFP02787 698 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 MRPL3P09001 348 aaKnown RBP12.76□□□□□ -0.37
COLCA2-202ENST00000526216 ATP6V1B1P15313 513 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 PCMT1P22061 227 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 EEF1B2P24534 225 aaKnown RBP12.76□□□□□ -0.37
COLCA2-202ENST00000526216 PTGS2P35354 604 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 MAP2K4P45985 399 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 RPS7P62081 194 aaKnown RBP12.76□□□□□ -0.37
COLCA2-202ENST00000526216 TMED1Q13445 227 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 GGTLC2Q14390 218 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 KRTCAP3Q53RY4 240 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 SLC35D3Q5M8T2 416 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 OTPQ5XKR4 325 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 RTL6Q6ICC9 239 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 LRFN4Q6PJG9 635 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 SLC25A47Q6Q0C1 308 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 TUSC5Q8IXB3 177 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 C9orf106Q8NAJ2 232 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 ZNF511Q8NB15 262 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 OR51G2Q8NGK0 314 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 TRIB1Q96RU8 372 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 ZNF649Q9BS31 505 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 RNF122Q9H9V4 155 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 HAO2Q9NYQ3 351 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 H2AFY2Q9P0M6 372 aaPredicted RBP12.76□□□□□ -0.37
COLCA2-202ENST00000526216 KLHL9Q9P2J3 617 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 RCE1Q9Y256 329 aa12.76□□□□□ -0.37
COLCA2-202ENST00000526216 A0A087WXM4 84 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 TVP23AA6NH52 213 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 ZNF726A6NNF4 738 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 ZNF724A8MTY0 619 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 ERVH48-1M5A8F1 160 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 AHCYL1O43865 530 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 SELENOFO60613 162 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 UPK3AO75631 287 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 SCG5P05408 212 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 TFAP2AP05549 437 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 GAAP10253 952 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 ZNF133P52736 654 aaPredicted RBP12.75□□□□□ -0.37
COLCA2-202ENST00000526216 CLRN1P58418 232 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 GUSBP1Q15486 140 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 XAF1Q6GPH4 301 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 SEM1Q6ZVN7 128 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 LINGO2Q7L985 606 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 CHMP1BQ7LBR1 199 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 AAED1Q7RTV5 226 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 PRSS48Q7RTY5 328 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 NUFIP2Q7Z417 695 aaKnown RBP12.75□□□□□ -0.37
COLCA2-202ENST00000526216 C20orf196Q8IYI0 205 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 RPRMLQ8N4K4 120 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 RFLNBQ8N5W9 214 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 PROKR2Q8NFJ6 384 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 OR2T4Q8NH00 348 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 MCHR2Q969V1 340 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 MRPS26Q9BYN8 205 aaKnown RBP12.75□□□□□ -0.37
COLCA2-202ENST00000526216 PRRG4Q9BZD6 226 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 RACGAP1Q9H0H5 632 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 RERGLQ9H628 205 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 MARCH7Q9H992 704 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 MRPL22Q9NWU5 206 aaKnown RBP12.75□□□□□ -0.37
COLCA2-202ENST00000526216 DIMT1Q9UNQ2 313 aaKnown RBP12.75□□□□□ -0.37
COLCA2-202ENST00000526216 COA3Q9Y2R0 106 aaPredicted RBP12.75□□□□□ -0.37
COLCA2-202ENST00000526216 UGT2A1Q9Y4X1 527 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 COMMD3-BMI1R4GMX3 469 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 NBEAQ8NFP9 2946 aa12.75□□□□□ -0.37
COLCA2-202ENST00000526216 TLN1Q9Y490 2541 aaKnown RBP12.75□□□□□ -0.37
COLCA2-202ENST00000526216 CENPBD1B2RD01 187 aa12.74□□□□□ -0.37
COLCA2-202ENST00000526216 MPZL1O95297 269 aa12.74□□□□□ -0.37
COLCA2-202ENST00000526216 IGHA1P01876 353 aa12.74□□□□□ -0.37
COLCA2-202ENST00000526216 SBK2P0C263 348 aa12.74□□□□□ -0.37
COLCA2-202ENST00000526216 AGTR1P30556 359 aa12.74□□□□□ -0.37
COLCA2-202ENST00000526216 CD79BP40259 229 aa12.74□□□□□ -0.37
COLCA2-202ENST00000526216 NAA10P41227 235 aaPredicted RBP12.74□□□□□ -0.37
COLCA2-202ENST00000526216 CSNK1A1P48729 337 aa12.74□□□□□ -0.37
COLCA2-202ENST00000526216 HCCSP53701 268 aa12.74□□□□□ -0.37
COLCA2-202ENST00000526216 RAB40BQ12829 278 aa12.74□□□□□ -0.37
COLCA2-202ENST00000526216 BLMHQ13867 455 aa12.74□□□□□ -0.37
COLCA2-202ENST00000526216 RNPS1Q15287 305 aaKnown RBP12.74□□□□□ -0.37
COLCA2-202ENST00000526216 LCN1P1Q5VSP4 162 aa12.74□□□□□ -0.37
COLCA2-202ENST00000526216 ZNF585AQ6P3V2 769 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms