RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 GTDC1Q4AE62 458 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 FGD3Q5JSP0 725 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 DMKNQ6E0U4 476 aaPredicted RBP4.02□□□□□ -1.77
CD44-220ENST00000525688 C22orf42Q6IC83 251 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 FAM53AQ6NSI3 398 aaPredicted RBP4.02□□□□□ -1.77
CD44-220ENST00000525688 NEPROQ6NW34 567 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 CD300LGQ6UXG3 332 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 ZNF562Q6V9R5 426 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 TMPRSS11AQ6ZMR5 421 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 RTL4Q6ZR62 310 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 Q7L0L9 218 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 C5orf24Q7Z6I8 188 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 ANKRD37Q7Z713 158 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 MOB3BQ86TA1 216 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 ERICH1Q86X53 443 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 ERI1Q8IV48 349 aaKnown RBP4.02□□□□□ -1.77
CD44-220ENST00000525688 ZNF100Q8IYN0 542 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 BOD1L2Q8IYS8 172 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 ZBED8Q8IZ13 594 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 ADAD2Q8NCV1 583 aaKnown RBP4.02□□□□□ -1.77
CD44-220ENST00000525688 OR5D18Q8NGL1 313 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 OR52E5Q8NH55 327 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 FAM110BQ8TC76 370 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 TCP10LQ8TDR4 215 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 LRRC15Q8TF66 581 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 TMEM190Q8WZ59 177 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 UPRTQ96BW1 309 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 NUS1Q96E22 293 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 DNAJC1Q96KC8 554 aaKnown RBP4.02□□□□□ -1.77
CD44-220ENST00000525688 SERPINB11Q96P15 392 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 TAAR1Q96RJ0 339 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 RANBP9Q96S59 729 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 CYP2S1Q96SQ9 504 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 C1orf198Q9H425 327 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 ZNF665Q9H7R5 613 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 NECAP2Q9NVZ3 263 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 FZR1Q9UM11 496 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 ZNF236Q9UL36 1845 aa4.02□□□□□ -1.77
CD44-220ENST00000525688 MN1Q10571 1320 aaPredicted RBP4.01□□□□□ -1.77
CD44-220ENST00000525688 COL11A1P12107 1806 aaPredicted RBP4.01□□□□□ -1.77
CD44-220ENST00000525688 A0A1W2PRD5 423 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 SMIM23A6NLE4 172 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 SRRM4A7MD48 611 aaKnown RBP4.01□□□□□ -1.77
CD44-220ENST00000525688 A8MVM7 634 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 ZNF732B4DXR9 585 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 H0YJX3 145 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 M0R3G1 203 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 IMPA2O14732 288 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 B4GAT1O43505 415 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 TRMUO75648 421 aaKnown RBP4.01□□□□□ -1.77
CD44-220ENST00000525688 GP1BAP07359 652 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 CD48P09326 243 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 RD3LP0DJH9 198 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 NR2C1P13056 603 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 CCL5P13501 91 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 ZNF7P17097 686 aaPredicted RBP4.01□□□□□ -1.77
CD44-220ENST00000525688 RPL35AP18077 110 aaKnown RBP4.01□□□□□ -1.77
CD44-220ENST00000525688 PGAM1P18669 254 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 AOC1P19801 751 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 PGCP20142 388 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 BCKDHBP21953 392 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 UGT1A4P22310 534 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 GPX3P22352 226 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 AADACP22760 399 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 DCKP27707 260 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 HSD11B1P28845 292 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 UGT1A3P35503 534 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 ACVR1BP36896 505 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 RPL13AP40429 203 aaKnown RBP4.01□□□□□ -1.77
CD44-220ENST00000525688 SLC26A3P40879 764 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 OR3A2P47893 321 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 GNG10P50151 68 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 PLK1P53350 603 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 DCDC1P59894 354 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 IL9RQ01113 521 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 OC90Q02509 493 aaPredicted RBP4.01□□□□□ -1.77
CD44-220ENST00000525688 MFGE8Q08431 387 aaPredicted RBP4.01□□□□□ -1.77
CD44-220ENST00000525688 RBBP4Q09028 425 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 SERTAD2Q14140 314 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 GRB7Q14451 532 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 CCL14Q16627 93 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 PPP1R3AQ16821 1122 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 PAN3Q58A45 887 aaKnown RBP4.01□□□□□ -1.77
CD44-220ENST00000525688 LY6G6FQ5SQ64 297 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 UTF1Q5T230 341 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 ADAM5Q6NVV9 412 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 BHLHB9Q6PI77 547 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 PAQR6Q6TCH4 344 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 C19orf35Q6ZS72 473 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 SLC16A14Q7RTX9 510 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 NET1Q7Z628 596 aaPredicted RBP4.01□□□□□ -1.77
CD44-220ENST00000525688 TMEM17Q86X19 198 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 ZFAND4Q86XD8 727 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 CRLF3Q8IUI8 442 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 APRG1Q8IVJ8 170 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 ZC3H3Q8IXZ2 948 aaKnown RBP4.01□□□□□ -1.77
CD44-220ENST00000525688 IQCKQ8N0W5 287 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 CCDC112Q8NEF3 446 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 B3GNT7Q8NFL0 401 aa4.01□□□□□ -1.77
CD44-220ENST00000525688 LGALS14Q8TCE9 139 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms