RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 CAMK2DQ13557 499 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 SLMAPQ14BN4 828 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 TMEM44Q2T9K0 475 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 TMEM35AQ53FP2 167 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 PDSS1Q5T2R2 415 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 AWAT2Q6E213 333 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 TEX38Q6PEX7 206 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 SPATA21Q7Z572 469 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 CTAGE6Q86UF2 777 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 VSIG1Q86XK7 387 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 C17orf78Q8N4C9 275 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 NUP37Q8NFH4 326 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 OR4L1Q8NH43 312 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 WDR20Q8TBZ3 569 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 TMEM19Q96HH6 336 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 ANKRD27Q96NW4 1050 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 NDNQ99608 321 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 KCNS3Q9BQ31 491 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 TBL1YQ9BQ87 522 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 NXF5Q9H1B4 397 aaKnown RBP5.67□□□□□ -1.5
NEDD8-203ENST00000524927 SEMA6AQ9H2E6 1030 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 LRMDAQ9H2I8 198 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 SPNS1Q9H2V7 528 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 PTGES2Q9H7Z7 377 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 ANKZF1Q9H8Y5 726 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 TMEM165Q9HC07 324 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 MMP26Q9NRE1 261 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 ZNF224Q9NZL3 707 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 RCC2Q9P258 522 aaKnown RBP5.67□□□□□ -1.5
NEDD8-203ENST00000524927 CCL27Q9Y4X3 112 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 INSIG2Q9Y5U4 225 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 PKHD1P08F94 4074 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 IGHV3OR16-10A0A075B7F0 116 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 A0A1W2PRQ8 180 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 OR6C70A6NIJ9 312 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 NIPSNAP2O75323 286 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 HSPA4LO95757 839 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 IGHMP01871 453 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 HIST1H1TP22492 207 aaPredicted RBP5.66□□□□□ -1.5
NEDD8-203ENST00000524927 KDELR1P24390 212 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 HPDP32754 393 aaPredicted RBP5.66□□□□□ -1.5
NEDD8-203ENST00000524927 MC5RP33032 325 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 RPL22P35268 128 aaKnown RBP5.66□□□□□ -1.5
NEDD8-203ENST00000524927 NR2C2P49116 596 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 TTPAP49638 278 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 VEGFCP49767 419 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 GAS1P54826 345 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 REEP5Q00765 189 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 PLCXD2Q0VAA5 305 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 PRPSAP1Q14558 356 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 MELKQ14680 651 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 GABRA6Q16445 453 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 ZNF239Q16600 458 aaKnown RBP5.66□□□□□ -1.5
NEDD8-203ENST00000524927 NSUN5P1Q3KNT7 163 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 ACSBG2Q5FVE4 666 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 HBMQ6B0K9 141 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 LRRC70Q7Z2Q7 622 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 NDUFA11Q86Y39 141 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 C1orf174Q8IYL3 243 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 IQCF1Q8N6M8 205 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 ZNF615Q8N8J6 731 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 WDR31Q8NA23 367 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 ZNF114Q8NC26 417 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 OR2L5Q8NG80 312 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 OR2M3Q8NG83 312 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 OR4F15Q8NGB8 312 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 OR52K1Q8NGK4 314 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 OR10S1Q8NGN2 331 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 DOK4Q8TEW6 326 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 SLC38A5Q8WUX1 472 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 RNF138Q8WVD3 245 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 UPRTQ96BW1 309 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 LRRC45Q96CN5 670 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 PHF21BQ96EK2 531 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 PSD2Q9BQI7 771 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 KATNB1Q9BVA0 655 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 DSN1Q9H410 356 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 EDA2RQ9HAV5 297 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 KCNG2Q9UJ96 466 aa5.66□□□□□ -1.5
NEDD8-203ENST00000524927 KMT2AQ03164 3969 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 LRIT2A6NDA9 550 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 TNFSF11O14788 317 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 SYNGR3O43761 229 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 CCDC175P0C221 793 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 FCGR1AP12314 374 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 GZMAP12544 262 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 MYOD1P15172 320 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 GPX3P22352 226 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 GABRA5P31644 462 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 CDKN2AP42771 156 aaKnown RBP5.65□□□□□ -1.5
NEDD8-203ENST00000524927 PLA2G16P53816 162 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 CARD18P57730 90 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 ISL1P61371 349 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 EGR4Q05215 589 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 PAX8Q06710 450 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 POU6F1Q14863 301 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 ADPRMQ3LIE5 342 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 AVPI1Q5T686 147 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 CST9LP1Q5W188 147 aa5.65□□□□□ -1.5
NEDD8-203ENST00000524927 FBXW9Q5XUX1 488 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms