RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 MFSD2BA6NFX1 497 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 SNRPGP15A8MWD9 76 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 GMDSO60547 372 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 GALR3O60755 368 aaPredicted RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 STX11O75558 287 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 SNAPC5O75971 98 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 ECDO95905 644 aaPredicted RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 NGFRP08138 427 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 MRPL3P09001 348 aaKnown RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 ACSM4P0C7M7 580 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 OR2T7P0C7T2 308 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 ZNF888P0CJ79 500 aaPredicted RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 LIPCP11150 499 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 CCL4P13236 92 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 PLA2G2AP14555 144 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 ZNF3P17036 446 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 CTRB1P17538 263 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 BMP7P18075 431 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 CXCL2P19875 107 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 PSMB1P20618 241 aaKnown RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 LCN1P31025 176 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 SLC6A6P31641 620 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 PYCR1P32322 319 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 ACVR1BP36896 505 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 ACTR1BP42025 376 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 RBM34P42696 430 aaKnown RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 PTH2RP49190 550 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 GBX2P52951 348 aaPredicted RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 ACTR1AP61163 376 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 RAP2BP61225 183 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 RPS15AP62244 130 aaKnown RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 ACTA2P62736 377 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 ACTG2P63267 376 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 BTN3A2P78410 334 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 MRPS10P82664 201 aaKnown RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 ID3Q02535 119 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 MGAT2Q10469 447 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 SQSTM1Q13501 440 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 RUNX2Q13950 521 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 FGFBP1Q14512 234 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 RNASE12Q5GAN4 147 aaKnown RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 ZNF684Q5T5D7 378 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 NKAIN2Q5VXU1 208 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 ZNF626Q68DY1 528 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 CTRB2Q6GPI1 263 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 RPL22L1Q6P5R6 122 aaKnown RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 ZCCHC12Q6PEW1 402 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 GLDNQ6ZMI3 551 aaPredicted RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 ESPNLQ6ZVH7 1005 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 PRSS42Q7Z5A4 293 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 SLC35F2Q8IXU6 374 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 RCBTB1Q8NDN9 531 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 OR2T27Q8NH04 317 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 OR14A16Q8NHC5 309 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 LHFPL5Q8TAF8 219 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 PATE1Q8WXA2 126 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 RGP1Q92546 391 aaPredicted RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 RBPMSQ93062 196 aaKnown RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 BPIFA2Q96DR5 249 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 OMA1Q96E52 524 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 WDR89Q96FK6 387 aaPredicted RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 PLPPR2Q96GM1 343 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 KLHL15Q96M94 604 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 ERMAPQ96PL5 475 aaPredicted RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 SERINC2Q96SA4 455 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 ZNF559Q9BR84 538 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 NUDT22Q9BRQ3 303 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 IFT27Q9BW83 186 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 NMNAT2Q9BZQ4 307 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 CACYBPQ9HB71 228 aaKnown RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 TAS2R5Q9NYW4 299 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 FLRT3Q9NZU0 649 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 FBXL4Q9UKA2 621 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 MED31Q9Y3C7 131 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 MAB21L2Q9Y586 359 aa7.1□□□□□ -1.27
SPIDR-223ENST00000524033 FLNBO75369 2602 aaKnown RBP7.1□□□□□ -1.27
SPIDR-223ENST00000524033 GOLGA4Q13439 2230 aaKnown RBP7.09□□□□□ -1.27
SPIDR-223ENST00000524033 TRAV27A0A087WT01 109 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 IGHV1OR21-1A0A087WYE8 117 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 A0A1B0GWA3 101 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 A0A1W2PPL8 197 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 F8W735 103 aaPredicted RBP7.09□□□□□ -1.27
SPIDR-223ENST00000524033 M0R233 179 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 AIPO00170 330 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 P2RX6O15547 441 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 FOXS1O43638 330 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 PPM1BO75688 479 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 KRT33AO76009 404 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 IFNGP01579 166 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 GKN3PP0CG01 181 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 CALCBP10092 127 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 CPMP14384 443 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 IFNGR1P15260 489 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 PTNP21246 168 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 DRD5P21918 477 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 CFPP27918 469 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 SSTR2P30874 369 aa7.09□□□□□ -1.27
SPIDR-223ENST00000524033 ACAA2P42765 397 aaKnown RBP7.09□□□□□ -1.27
SPIDR-223ENST00000524033 PPM1FP49593 454 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms