RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 ZNF749O43361 778 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 HCRTR1O43613 425 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 GATCO43716 136 aaKnown RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 GRAP2O75791 330 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 RAB3DO95716 219 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 FTH1P02794 183 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 BPGMP07738 259 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 CD48P09326 243 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 CD3GP09693 182 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 ACADSP16219 412 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 PGAM1P18669 254 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 XRCC1P18887 633 aaPredicted RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 CD22P20273 847 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 MAGP20916 626 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 BGNP21810 368 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 GIFP27352 417 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 SPRP35270 261 aaPredicted RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 ACVRL1P37023 503 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 VHLP40337 213 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 KIR3DL2P43630 455 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 ZFP36L2P47974 494 aaKnown RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 RPL34P49207 117 aaKnown RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 GNG10P50151 68 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 ATP5J2P56134 94 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 TPTEP56180 551 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 ACTBP60709 375 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 ACTA2P62736 377 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 ACTG1P63261 375 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 ACTG2P63267 376 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 ACTC1P68032 377 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 ACTA1P68133 377 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 RHAGQ02094 409 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 CDH17Q12864 832 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 FOXI1Q12951 378 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 GPR18Q14330 331 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 KIR2DS5Q14953 304 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 TRIP10Q15642 601 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 TSC22D1Q15714 1073 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 RPE65Q16518 533 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 HIST2H2ACQ16777 129 aaPredicted RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 AARS2Q5JTZ9 985 aaKnown RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 SPANXN3Q5MJ09 141 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 VAX1Q5SQQ9 334 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 HECTD2Q5U5R9 776 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 C1orf189Q5VU69 101 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 METTL21CQ5VZV1 264 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 CGB2Q6NT52 195 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 FBXO42Q6P3S6 717 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 ANKRD16Q6P6B7 361 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 HSDL2Q6YN16 418 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 QSOX2Q6ZRP7 698 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 RFLNAQ6ZTI6 216 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 UTS2BQ765I0 119 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 SLC35D2Q76EJ3 337 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 ZNF627Q7L945 461 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 SLC16A9Q7RTY1 509 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 NET1Q7Z628 596 aaPredicted RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 PATL1Q86TB9 770 aaKnown RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 PLD3Q8IV08 490 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 LAX1Q8IWV1 398 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 CLEC4FQ8N1N0 589 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 Q8N1X5 172 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 RYBPQ8N488 228 aaPredicted RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 C17orf78Q8N4C9 275 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 KIF2BQ8N4N8 673 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 MDS2Q8NDY4 140 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 FAM83FQ8NEG4 500 aaPredicted RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 OR4C5Q8NGB2 326 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 OR51L1Q8NGJ5 315 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 OR10Z1Q8NGY1 313 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 OR14L1PQ8NHC6 308 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 NEU4Q8WWR8 484 aaPredicted RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 ELMO1Q92556 727 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 R3HDM4Q96D70 268 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 MSI2Q96DH6 328 aaKnown RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 TM4SF19Q96DZ7 209 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 CMTM5Q96DZ9 223 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 SCMH1Q96GD3 660 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 METTL2AQ96IZ6 378 aaKnown RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 QKIQ96PU8 341 aaKnown RBP eCLIP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 VAT1Q99536 393 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 SNRNP25Q9BV90 132 aaKnown RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 C6orf62Q9GZU0 229 aaPredicted RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 KCNN2Q9H2S1 579 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 OR51B6Q9H340 312 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 C10orf88Q9H8K7 445 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 FOLH1BQ9HBA9 442 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 SLCO1B3Q9NPD5 702 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 PHPT1Q9NRX4 125 aaPredicted RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 GPATCH2LQ9NWQ4 482 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 ANKRD10Q9NXR5 420 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 PTTG3PQ9NZH4 202 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 ADA2Q9NZK5 511 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 STOX2Q9P2F5 926 aaPredicted RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 SLC17A7Q9P2U7 560 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 NKX1-2Q9UD57 310 aaPredicted RBP4.52□□□□□ -1.69
PABPC1-223ENST00000523636 GNPTGQ9UJJ9 305 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 PACSIN3Q9UKS6 424 aa4.52□□□□□ -1.69
PABPC1-223ENST00000523636 PLXNB1O43157 2135 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms