RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 CD8B2A6NJW9 211 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 FIGNL2A6NMB9 653 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 ZNF726A6NNF4 738 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 XPNPEP2O43895 674 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 WDR1O75083 606 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 AQP8O94778 261 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 SPI1P17947 270 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 CRABP1P29762 137 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 CENPAP49450 140 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 SLC35A2P78381 396 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 RUNX1T1Q06455 604 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 APOFQ13790 326 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 GGTLC2Q14390 218 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 MEPCEQ7L2J0 689 aaKnown RBP11.6□□□□□ -0.55
CPNE3-205ENST00000522240 BCDIN3DQ7Z5W3 292 aaKnown RBP11.6□□□□□ -0.55
CPNE3-205ENST00000522240 ZBTB46Q86UZ6 589 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 MCEMP1Q8IX19 187 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 TMEM123Q8N131 208 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 ZIC4Q8N9L1 334 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 BBS1Q8NFJ9 593 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 OR9Q1Q8NGQ5 310 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 FAM57AQ8TBR7 257 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 PTP4A1Q93096 173 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 KISS1RQ969F8 398 aaPredicted RBP11.6□□□□□ -0.55
CPNE3-205ENST00000522240 OTULINQ96BN8 352 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 INTS12Q96CB8 462 aaKnown RBP11.6□□□□□ -0.55
CPNE3-205ENST00000522240 TXNDC15Q96J42 360 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 ZNF385AQ96PM9 386 aaKnown RBP11.6□□□□□ -0.55
CPNE3-205ENST00000522240 OR2M2Q96R28 347 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 EMC6Q9BV81 110 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 MRPL13Q9BYD1 178 aaKnown RBP11.6□□□□□ -0.55
CPNE3-205ENST00000522240 SYT4Q9H2B2 425 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 DUSP21Q9H596 190 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 MED20Q9H944 212 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 CALHM2Q9HA72 323 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 RPRD1BQ9NQG5 326 aaKnown RBP11.6□□□□□ -0.55
CPNE3-205ENST00000522240 HAO2Q9NYQ3 351 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 MOKQ9UQ07 419 aa11.6□□□□□ -0.55
CPNE3-205ENST00000522240 H7C1C5 153 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 SLC43A1O75387 559 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 ZNF432O94892 652 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 GLCEO94923 617 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 RPSAP08865 295 aaKnown RBP11.59□□□□□ -0.55
CPNE3-205ENST00000522240 HOXD4P09016 255 aaPredicted RBP11.59□□□□□ -0.55
CPNE3-205ENST00000522240 EDN3P14138 238 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 MTNR1AP48039 350 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 CSNK1A1P48729 337 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 ZNF133P52736 654 aaPredicted RBP11.59□□□□□ -0.55
CPNE3-205ENST00000522240 CLRN1P58418 232 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 LCN6P62502 163 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 RAB40BQ12829 278 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 POU4F2Q12837 409 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 HIST3H3Q16695 136 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 KLHL22Q53GT1 634 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 PRR30Q53SZ7 412 aaPredicted RBP11.59□□□□□ -0.55
CPNE3-205ENST00000522240 THEM4Q5T1C6 240 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 NSUN5P2Q63ZY6 315 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 P4HA3Q7Z4N8 544 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 ZNF540Q8NDQ6 660 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 NMD3Q96D46 503 aaKnown RBP11.59□□□□□ -0.55
CPNE3-205ENST00000522240 GMPPAQ96IJ6 420 aaPredicted RBP11.59□□□□□ -0.55
CPNE3-205ENST00000522240 SIGLEC11Q96RL6 698 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 OR51V1Q9H2C8 321 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 ASF1BQ9NVP2 202 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 ASB6Q9NWX5 421 aa11.59□□□□□ -0.55
CPNE3-205ENST00000522240 IGLV1-36A0A0B4J1U3 117 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 MBD3L4A6NDZ8 208 aaPredicted RBP11.58□□□□□ -0.56
CPNE3-205ENST00000522240 MBD3L3A6NE82 208 aaPredicted RBP11.58□□□□□ -0.56
CPNE3-205ENST00000522240 MBD3L5A6NJ08 208 aaPredicted RBP11.58□□□□□ -0.56
CPNE3-205ENST00000522240 OR6C65A6NJZ3 312 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 SS18L1O75177 396 aaPredicted RBP11.58□□□□□ -0.56
CPNE3-205ENST00000522240 SMNDC1O75940 238 aaKnown RBP eCLIP11.58□□□□□ -0.56
CPNE3-205ENST00000522240 TGM6O95932 706 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 TPOP07202 933 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 CLUP10909 449 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 ABOP16442 354 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 GSTT1P30711 240 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 BLVRAP53004 296 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 RPS7P62081 194 aaKnown RBP11.58□□□□□ -0.56
CPNE3-205ENST00000522240 RBPJQ06330 500 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 CAMK2DQ13557 499 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 LY6DQ14210 128 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 EIF2S3LQ2VIR3 472 aaKnown RBP11.58□□□□□ -0.56
CPNE3-205ENST00000522240 KLHL12Q53G59 568 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 LINC01590Q5TEZ4 76 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 OR2A2Q6IF42 318 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 ZNF773Q6PK81 442 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 GFRALQ6UXV0 394 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 AHSA2Q719I0 299 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 AAED1Q7RTV5 226 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 CD163Q86VB7 1156 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 WDFY1Q8IWB7 410 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 POMGNT2Q8NAT1 580 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 PROKR2Q8NFJ6 384 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 OR5M9Q8NGP3 310 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 MBD3L2Q8NHZ7 208 aaPredicted RBP11.58□□□□□ -0.56
CPNE3-205ENST00000522240 GGHQ92820 318 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 MYDGFQ969H8 173 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 TMEM54Q969K7 222 aa11.58□□□□□ -0.56
CPNE3-205ENST00000522240 RNFT2Q96EX2 444 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms