RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 SERPIND1P05546 499 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 IGKV1-13P0DP09 117 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 ANXA8P13928 327 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 RPS15P62841 145 aaKnown RBP2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 IGLV3-21P80748 117 aaPredicted RBP2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 ZNF45Q02386 682 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 MAB21L1Q13394 359 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 ILKQ13418 452 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 CCDC14Q49A88 953 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 SPANXN2Q5MJ10 180 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 ZNF658Q5TYW1 1059 aaPredicted RBP2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 MARC1Q5VT66 337 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 ANXA8L1Q5VT79 327 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 C1orf146Q5VVC0 180 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 SPINK14Q6IE38 97 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 TRIM40Q6P9F5 258 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 HSD17B13Q7Z5P4 300 aaPredicted RBP2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 SLC26A11Q86WA9 606 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 CCDC65Q8IXS2 484 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 OFCC1Q8IZS5 231 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 TMEM252Q8N6L7 170 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 CD177Q8N6Q3 437 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 HSD17B11Q8NBQ5 300 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 OR51S1Q8NGJ8 323 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 GPR151Q8TDV0 419 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 PYROXD1Q8WU10 500 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 ACOT11Q8WXI4 607 aaPredicted RBP2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 PEX13Q92968 403 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 RPUSD4Q96CM3 377 aaKnown RBP2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 OR8B4Q96RC9 309 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 HIST1H4GQ99525 98 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 SH3GL1Q99961 368 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 RIOK2Q9BVS4 552 aaKnown RBP2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 ILKAPQ9H0C8 392 aaPredicted RBP2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 DEFB127Q9H1M4 99 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 AUNIPQ9H7T9 357 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 PSMC3IPQ9P2W1 217 aaPredicted RBP2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 CLEC4EQ9ULY5 219 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 KIF25-AS1Q9Y6Z4 181 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 MYH1P12882 1939 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 SPEF2Q9C093 1822 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 PAPPAQ13219 1627 aa2.42□□□□□ -2.02
HMGN1P28-201ENST00000521340 MYO5AQ9Y4I1 1855 aaKnown RBP2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 COL2A1P02458 1487 aaPredicted RBP2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 IBTKQ9P2D0 1353 aaPredicted RBP2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 ADAMTS9Q9P2N4 1935 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 ZNF726A6NNF4 738 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 C12orf77C9JDV5 145 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 C9JVG2 144 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 EIF3HO15372 352 aaKnown RBP eCLIP2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 CLOCKO15516 846 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 SNAPINO95295 136 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 FTH1P02794 183 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 KRTAP1-4P0C5Y4 121 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 OR8G3PP0DMU2 310 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 FOLR1P15328 257 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 OR3A4PP47883 348 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 OR1G1P47890 313 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 RAB9AP51151 201 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 ACLYP53396 1101 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 APOC4P55056 127 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 ITIH4Q14624 930 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 HSDL2Q6YN16 418 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 ZNF836Q6ZNA1 936 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 C19orf35Q6ZS72 473 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 ARCQ7LC44 396 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 LHFPL3Q86UP9 236 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 ERI1Q8IV48 349 aaKnown RBP2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 MMAAQ8IVH4 418 aaKnown RBP2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 ZNF557Q8N988 423 aaPredicted RBP2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 BBS1Q8NFJ9 593 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 KIFAP3Q92845 792 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 SMARCD2Q92925 531 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 SLC38A4Q969I6 547 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 ZNF707Q96C28 371 aaPredicted RBP2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 C11orf70Q9BRQ4 267 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 MTG1Q9BT17 334 aaPredicted RBP2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 TMEM59Q9BXS4 323 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 ACTR6Q9GZN1 396 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 FAM192AQ9GZU8 254 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 OR51J1Q9H342 316 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 SH2D2AQ9NP31 389 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 FGF20Q9NP95 211 aaPredicted RBP2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 PLSCR3Q9NRY6 295 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 XCL2Q9UBD3 114 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 B4GALT7Q9UBV7 327 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 PSME2Q9UL46 239 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 ARAP2Q8WZ64 1704 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 SLIT1O75093 1534 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 EVC2Q86UK5 1308 aa2.41□□□□□ -2.02
HMGN1P28-201ENST00000521340 XIRP1Q702N8 1843 aaKnown RBP2.4□□□□□ -2.02
HMGN1P28-201ENST00000521340 DOCK2Q92608 1830 aa2.4□□□□□ -2.02
HMGN1P28-201ENST00000521340 ARHGAP23Q9P227 1491 aa2.4□□□□□ -2.02
HMGN1P28-201ENST00000521340 C4AP0C0L4 1744 aa2.4□□□□□ -2.02
HMGN1P28-201ENST00000521340 C4BP0C0L5 1744 aa2.4□□□□□ -2.02
HMGN1P28-201ENST00000521340 RTL1A6NKG5 1358 aa2.4□□□□□ -2.02
HMGN1P28-201ENST00000521340 ARHGEF10O15013 1369 aa2.4□□□□□ -2.02
HMGN1P28-201ENST00000521340 MSH6P52701 1360 aa2.4□□□□□ -2.02
HMGN1P28-201ENST00000521340 KIF24Q5T7B8 1368 aa2.4□□□□□ -2.02
HMGN1P28-201ENST00000521340 TRAV25A0A0B4J276 109 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms